RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ZNF672Q499Z4 452 aaPredicted RBP11.4□□□□□ -0.59
CLN6-215ENST00000636674 MUC21Q5SSG8 566 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 KALRNO60229 2985 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
CLN6-215ENST00000636674 C2orf91Q6ZV80 131 aa11.39□□□□□ -0.59
CLN6-215ENST00000636674 M0R1W7 72 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 SH2D1AO60880 128 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 GPR183P32249 361 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 VAMP3Q15836 100 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 LGALS9BQ3B8N2 356 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 LGALS9CQ6DKI2 356 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 ORMDL3Q8N138 153 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 ASCL2Q99929 193 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
CLN6-215ENST00000636674 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 SIGLEC8Q9NYZ4 499 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 CFAP46Q8IYW2 2715 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 D6R8Y8 96 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 NCR2O95944 276 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 PRB1P04280 392 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 IFI27P40305 119 aaPredicted RBP11.38□□□□□ -0.59
CLN6-215ENST00000636674 PAX8Q06710 450 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 OR1N2Q8NGR9 330 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 POLEQ07864 2286 aa11.38□□□□□ -0.59
CLN6-215ENST00000636674 H0Y8G0 127 aa11.37□□□□□ -0.59
CLN6-215ENST00000636674 RPL7P18124 248 aaKnown RBP11.37□□□□□ -0.59
CLN6-215ENST00000636674 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
CLN6-215ENST00000636674 PRR30Q53SZ7 412 aaPredicted RBP11.37□□□□□ -0.59
CLN6-215ENST00000636674 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
CLN6-215ENST00000636674 ZNF843Q8N446 348 aa11.37□□□□□ -0.59
CLN6-215ENST00000636674 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
CLN6-215ENST00000636674 FGF6P10767 208 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 CDKN1BP46527 198 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 BCL6BQ8N143 479 aaPredicted RBP11.36□□□□□ -0.59
CLN6-215ENST00000636674 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 PRR25Q96S07 402 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 A0A087X0K7 114 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 TMEM213A2RRL7 107 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 SEC11AP67812 179 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 MRPL51Q4U2R6 128 aaKnown RBP11.36□□□□□ -0.59
CLN6-215ENST00000636674 KLF17Q5JT82 389 aaPredicted RBP11.36□□□□□ -0.59
CLN6-215ENST00000636674 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
CLN6-215ENST00000636674 OR2T8A6NH00 312 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 PRTN3P24158 256 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
CLN6-215ENST00000636674 FAM106AQ4KMX7 169 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 THYN1Q9P016 225 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 HILPDAQ9Y5L2 63 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 HBDP02042 147 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 PCP4P48539 62 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 Q8N6K4 173 aa11.35□□□□□ -0.59
CLN6-215ENST00000636674 ADGRG4Q8IZF6 3080 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
CLN6-215ENST00000636674 OOSP1A8MZH6 123 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
CLN6-215ENST00000636674 BMI1P35226 326 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 NDPQ00604 133 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 LINC01560Q8TB33 94 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 TIMM8BQ9Y5J9 83 aaPredicted RBP11.34□□□□□ -0.59
CLN6-215ENST00000636674 S4R3C0 116 aa11.34□□□□□ -0.59
CLN6-215ENST00000636674 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.6
CLN6-215ENST00000636674 S100A7P31151 101 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 EBI3Q14213 229 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 CCDC144NLQ6NUI1 221 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
CLN6-215ENST00000636674 LINC01546A6NGU7 62 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 KLRD1Q13241 179 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 TMEM97Q5BJF2 176 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 TIMD4Q96H15 378 aa11.33□□□□□ -0.6
CLN6-215ENST00000636674 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
CLN6-215ENST00000636674 SIVA1O15304 175 aa11.32□□□□□ -0.6
CLN6-215ENST00000636674 IGHG4P01861 327 aa11.32□□□□□ -0.6
CLN6-215ENST00000636674 HES1Q14469 280 aa11.32□□□□□ -0.6
CLN6-215ENST00000636674 RABAC1Q9UI14 185 aa11.32□□□□□ -0.6
CLN6-215ENST00000636674 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 CTSGP08311 255 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 C1orf122Q6ZSJ8 110 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 OR9G4Q8NGQ1 327 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 SMAD5-AS1Q9Y6J3 95 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 FASNP49327 2511 aaKnown RBP11.31□□□□□ -0.6
CLN6-215ENST00000636674 CBY3A6NI87 242 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 NPYP01303 97 aa11.31□□□□□ -0.6
CLN6-215ENST00000636674 PPBPP02775 128 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms