RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RLN2P04090 185 aa12.68□□□□□ -0.38
PNKP-225ENST00000636214 RPL29P47914 159 aaKnown RBP12.68□□□□□ -0.38
PNKP-225ENST00000636214 LINC00299Q6ZSB3 139 aa12.68□□□□□ -0.38
PNKP-225ENST00000636214 TMEM252Q8N6L7 170 aa12.68□□□□□ -0.38
PNKP-225ENST00000636214 SLC39A9Q9NUM3 307 aa12.68□□□□□ -0.38
PNKP-225ENST00000636214 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 AZU1P20160 251 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 LEPP41159 167 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 ASAH1Q13510 395 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 MORN5Q5VZ52 161 aa12.67□□□□□ -0.38
PNKP-225ENST00000636214 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
PNKP-225ENST00000636214 IGSF23A1L1A6 192 aa12.66□□□□□ -0.38
PNKP-225ENST00000636214 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
PNKP-225ENST00000636214 MPDU1O75352 247 aa12.66□□□□□ -0.38
PNKP-225ENST00000636214 NUDT3O95989 172 aa12.66□□□□□ -0.38
PNKP-225ENST00000636214 FAM3BP58499 235 aaPredicted RBP12.66□□□□□ -0.38
PNKP-225ENST00000636214 C11orf1Q9H5F2 150 aa12.66□□□□□ -0.38
PNKP-225ENST00000636214 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 CBY3A6NI87 242 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 H3BQ15 152 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 J3KRW8 73 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 ZNF253O75346 499 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 FCN2Q15485 313 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.38
PNKP-225ENST00000636214 TIMM9Q9Y5J7 89 aa12.65□□□□□ -0.38
PNKP-225ENST00000636214 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
PNKP-225ENST00000636214 SNURFLB1AK76 121 aa12.64□□□□□ -0.39
PNKP-225ENST00000636214 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
PNKP-225ENST00000636214 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
PNKP-225ENST00000636214 PARD6GQ9BYG4 376 aaPredicted RBP12.64□□□□□ -0.39
PNKP-225ENST00000636214 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 IL15RAQ13261 267 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 CLINT1Q14677 625 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 RNASE8Q8TDE3 154 aaKnown RBP12.63□□□□□ -0.39
PNKP-225ENST00000636214 CHAC2Q8WUX2 184 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 ODF3Q96PU9 254 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 KCNIP2Q9NS61 270 aa12.63□□□□□ -0.39
PNKP-225ENST00000636214 E5RGE8 158 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 PRAF2O60831 178 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
PNKP-225ENST00000636214 CCL18P55774 89 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
PNKP-225ENST00000636214 PDE6HQ13956 83 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 MRPL53Q96EL3 112 aaKnown RBP12.62□□□□□ -0.39
PNKP-225ENST00000636214 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
PNKP-225ENST00000636214 HERC2O95714 4834 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 RTL8CO15255 209 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 UPK1BO75841 260 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 KIR3DS1Q14943 382 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 C1orf134Q5TEV5 83 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 OR5C1Q8NGR4 320 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 THAP6Q8TBB0 222 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
PNKP-225ENST00000636214 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 SIX6O95475 246 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 CT45A10P0DMU9 189 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 OR5I1Q13606 314 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 Q6ZR54 194 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 NMES1Q9C002 83 aa12.6□□□□□ -0.39
PNKP-225ENST00000636214 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
PNKP-225ENST00000636214 PYYP10082 97 aa12.59□□□□□ -0.39
PNKP-225ENST00000636214 NHLH2Q02577 135 aa12.59□□□□□ -0.39
PNKP-225ENST00000636214 INMT-MINDY4F8WBC2 141 aa12.58□□□□□ -0.4
PNKP-225ENST00000636214 M0R3E3 92 aa12.58□□□□□ -0.4
PNKP-225ENST00000636214 SLC25A5P05141 298 aaKnown RBP12.58□□□□□ -0.4
PNKP-225ENST00000636214 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
PNKP-225ENST00000636214 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.4
PNKP-225ENST00000636214 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
PNKP-225ENST00000636214 DNAH17Q9UFH2 4485 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 A0A1B0GVY2 172 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 C7orf71A4D174 169 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 GAGE7O76087 117 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 PET100P0DJ07 73 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 DEFA1P59665 94 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 DEFA3P59666 94 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 ERCC8Q13216 396 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 MRPL32Q9BYC8 188 aaKnown RBP12.57□□□□□ -0.4
PNKP-225ENST00000636214 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
PNKP-225ENST00000636214 SSNA1O43805 119 aa12.56□□□□□ -0.4
PNKP-225ENST00000636214 M6PRP20645 277 aa12.56□□□□□ -0.4
PNKP-225ENST00000636214 GCSAMLQ5JQS6 135 aa12.56□□□□□ -0.4
PNKP-225ENST00000636214 SLC25A2Q9BXI2 301 aa12.56□□□□□ -0.4
PNKP-225ENST00000636214 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms