RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	LINC00336	Q6ZUF6	198 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RNF182	Q8N6D2	247 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR11H7	Q8NGC8	314 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	C14orf144	Q96I85	54 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IGF2BP2-AS1	Q96M15	143 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NIPSNAP3B	Q9BS92	247 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	APOB	P04114	4563 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MUC4	Q99102	2169 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022		A0A087X0K7	114 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PLAC8L1	A1L4L8	177 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SMCO3	A2RU48	225 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HSBP1L1	C9JCN9	74 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FNDC10	F2Z333	226 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022		M0R2Z0	102 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MRPS12	O15235	138 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	DUSP14	O95147	198 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IFNA21	P01568	189 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	METTL15P1	P0C7V9	234 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	LINC00869	P0C866	280 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	CXCL3	P19876	107 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	S100A7	P31151	101 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TAS2R30	P59541	319 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ARL16	Q0P5N6	197 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ASAH1	Q13510	395 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RRN3P1	Q2M238	152 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IAH1	Q2TAA2	248 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	LGALS9B	Q3B8N2	356 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MZT2B	Q6NZ67	158 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NRARP	Q7Z6K4	114 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MITD1	Q8WV92	249 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	UHRF2	Q96PU4	802 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	C7orf50	Q9BRJ6	194 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TCEAL7	Q9BRU2	100 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NIT2	Q9NQR4	276 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HIGD1A	Q9Y241	93 aa		5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RCL1	Q9Y2P8	373 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1A-222	ENST00000636022	C7orf66	A4D0T2	115 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TCAP	O15273	167 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PLA2G10	O15496	165 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	INS	P01308	110 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IFNA7	P01567	189 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RLN2	P04090	185 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RPL7	P18124	248 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	INPP1	P49441	399 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RAP2B	P61225	183 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RRAS2	P62070	204 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SLC38A11	Q08AI6	406 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SPINK13	Q1W4C9	94 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TEPP	Q6URK8	271 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ATRAID	Q6UW56	229 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022		Q6ZR54	194 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ZNF738	Q8NE65	137 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TMEM208	Q9BTX3	173 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ARL6	Q9H0F7	186 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NPVF	Q9HCQ7	196 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HSPB11	Q9Y547	144 aa		5.17	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TRAV12-2	A0A075B6T6	113 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	C5orf52	A6NGY3	159 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM74A7	A6NL05	159 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	LYRM9	A8MSI8	78 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022		M0R2N4	97 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MBP	P02686	304 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR5G3	P0C626	314 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HTN3	P15516	51 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	AZU1	P20160	251 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TSPO	P30536	169 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	DAD1	P61803	113 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PSG3	Q16557	428 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM74A3	Q4VXF1	159 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TMEM88	Q6PEY1	159 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	BAP18	Q8IXM2	172 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR10P1	Q8NGE3	313 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR8A1	Q8NGG7	326 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	GGACT	Q9BVM4	153 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ARV1	Q9H2C2	271 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	GSKIP	Q9P0R6	139 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	MGAT4C	Q9UBM8	478 aa		5.16	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IGLV2-18	A0A075B6J9	118 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	PRSS29P	A6NIE9	313 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	AGPAT2	O15120	278 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	MPC2	O95563	127 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	SCGB1D2	O95969	90 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	LINC00614	P0C842	121 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	PRB4	P10163	310 aa	Predicted RBP	5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	CXCL2	P19875	107 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	HIST1H1A	Q02539	215 aa	Predicted RBP	5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	MORN5	Q5VZ52	161 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	LINC00305	Q7Z4B0	112 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	S100A7A	Q86SG5	101 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	ZNF546	Q86UE3	836 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	TMEM256	Q8N2U0	113 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	TMEM37	Q8WXS4	190 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	RPUSD4	Q96CM3	377 aa	Known RBP	5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	MGST2	Q99735	147 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	C20orf85	Q9H1P6	137 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	C11orf1	Q9H5F2	150 aa		5.15	□□□□□ -1.59
CACNA1A-222	ENST00000636022	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms