RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 IL22RA2Q969J5 263 aa12.12□□□□□ -0.47
CLN6-212ENST00000636020 CACFD1Q9UGQ2 172 aa12.12□□□□□ -0.47
CLN6-212ENST00000636020 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
CLN6-212ENST00000636020 TRAV6A0A075B6T7 132 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 INMT-MINDY4F8WBC2 141 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 ZFAND1Q8TCF1 268 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 MARCH1Q8TCQ1 289 aa12.11□□□□□ -0.47
CLN6-212ENST00000636020 ORM2P19652 201 aa12.1□□□□□ -0.47
CLN6-212ENST00000636020 ATP5IP56385 69 aaPredicted RBP12.1□□□□□ -0.47
CLN6-212ENST00000636020 SURF2Q15527 256 aaPredicted RBP12.1□□□□□ -0.47
CLN6-212ENST00000636020 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
CLN6-212ENST00000636020 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
CLN6-212ENST00000636020 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
CLN6-212ENST00000636020 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
CLN6-212ENST00000636020 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
CLN6-212ENST00000636020 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
CLN6-212ENST00000636020 CRYGDP07320 174 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 C10orf126Q8N4M7 172 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 RPUSD4Q96CM3 377 aaKnown RBP12.09□□□□□ -0.47
CLN6-212ENST00000636020 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
CLN6-212ENST00000636020 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
CLN6-212ENST00000636020 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
CLN6-212ENST00000636020 GATA2P23769 480 aaPredicted RBP12.08□□□□□ -0.48
CLN6-212ENST00000636020 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
CLN6-212ENST00000636020 TMEM182Q6ZP80 229 aaPredicted RBP12.08□□□□□ -0.48
CLN6-212ENST00000636020 RBKSQ9H477 322 aa12.08□□□□□ -0.48
CLN6-212ENST00000636020 HSPB7Q9UBY9 170 aa12.08□□□□□ -0.48
CLN6-212ENST00000636020 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 C7orf66A4D0T2 115 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 IL5P05113 134 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 ANXA7P20073 488 aaKnown RBP12.07□□□□□ -0.48
CLN6-212ENST00000636020 S100A7P31151 101 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 BPIFCQ8NFQ6 507 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 SCGB3A2Q96PL1 93 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 RTBDNQ9BSG5 229 aaPredicted RBP12.07□□□□□ -0.48
CLN6-212ENST00000636020 GSN-AS1Q9NRJ2 163 aa12.07□□□□□ -0.48
CLN6-212ENST00000636020 hCG_2014768A0A024R1R8 64 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 A0A087X0K7 114 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 H3BRN7 92 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 PRAF2O60831 178 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 RPL7P18124 248 aaKnown RBP12.06□□□□□ -0.48
CLN6-212ENST00000636020 CRYBA4P53673 196 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 ALG5Q9Y673 324 aa12.06□□□□□ -0.48
CLN6-212ENST00000636020 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 SLAQ13239 276 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 ST6GAL2Q96JF0 529 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 HHLA3Q9XRX5 114 aa12.05□□□□□ -0.48
CLN6-212ENST00000636020 C14orf166Q9Y224 244 aaKnown RBP12.05□□□□□ -0.48
CLN6-212ENST00000636020 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
CLN6-212ENST00000636020 UBE2MP61081 183 aaKnown RBP12.04□□□□□ -0.48
CLN6-212ENST00000636020 OR1S1Q8NH92 325 aa12.04□□□□□ -0.48
CLN6-212ENST00000636020 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
CLN6-212ENST00000636020 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
CLN6-212ENST00000636020 SEC22CQ9BRL7 303 aa12.04□□□□□ -0.48
CLN6-212ENST00000636020 J3KRW8 73 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 SPINK4O60575 86 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 OR4E1P0C645 316 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 BCAP31P51572 246 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 FHL2Q14192 279 aa12.03□□□□□ -0.48
CLN6-212ENST00000636020 RCL1Q9Y2P8 373 aaKnown RBP12.03□□□□□ -0.48
CLN6-212ENST00000636020 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
CLN6-212ENST00000636020 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.49
CLN6-212ENST00000636020 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
CLN6-212ENST00000636020 ZNF680Q8NEM1 530 aa12.02□□□□□ -0.49
CLN6-212ENST00000636020 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.49
CLN6-212ENST00000636020 KLF12Q9Y4X4 402 aa12.02□□□□□ -0.49
CLN6-212ENST00000636020 C9orf170A2RU37 121 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 PRAC2D3DTV9 90 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 K7EQD1 137 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 RS1O15537 224 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 AKR1C4P17516 323 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 RAB11AP62491 216 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 SMCO1Q147U7 214 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 CHAC2Q8WUX2 184 aa12.01□□□□□ -0.49
CLN6-212ENST00000636020 MRPL32Q9BYC8 188 aaKnown RBP12.01□□□□□ -0.49
CLN6-212ENST00000636020 GPN1Q9HCN4 374 aaPredicted RBP12.01□□□□□ -0.49
CLN6-212ENST00000636020 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
CLN6-212ENST00000636020 SFT2D2O95562 160 aa12□□□□□ -0.49
CLN6-212ENST00000636020 SRIP30626 198 aa12□□□□□ -0.49
CLN6-212ENST00000636020 WFDC2Q14508 124 aa12□□□□□ -0.49
CLN6-212ENST00000636020 C4orf46Q504U0 113 aa12□□□□□ -0.49
CLN6-212ENST00000636020 CHAC1Q9BUX1 264 aa12□□□□□ -0.49
CLN6-212ENST00000636020 ZNF331Q9NQX6 463 aaPredicted RBP12□□□□□ -0.49
CLN6-212ENST00000636020 HIGD1AQ9Y241 93 aa12□□□□□ -0.49
CLN6-212ENST00000636020 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
CLN6-212ENST00000636020 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms