RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 H3BUX3 64 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 H7C1H1 209 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 UTF1Q5T230 341 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 KIR2DL5AQ8N109 375 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 MRPS16Q9Y3D3 137 aaKnown RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV4-39P01824 125 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 Q5PR19 223 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 ARHGAP32A7KAX9 2087 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 BUB3O43684 328 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 FAM159AQ6UWV7 190 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 ERASQ7Z444 233 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 MRAP2Q96G30 205 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 MRPL36Q9P0J6 103 aaKnown RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 HERVK_113P61574 105 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 KLF17Q5JT82 389 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 PHLDA3Q9Y5J5 127 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 PRSS1P07477 247 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 C5orf56Q8N8D9 126 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 GATD1Q8NB37 220 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 LINC00479Q96M42 142 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 TGFAP01135 160 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 CSN3P07498 182 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 GCSHP23434 173 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 NUTF2P61970 127 aaKnown RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 ZNF664Q8N3J9 261 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 CD24P25063 80 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 LY6HO94772 140 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 OR9G4Q8NGQ1 327 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 RITA1Q96K30 269 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 M0R3E3 92 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 SSBP2P81877 361 aaPredicted RBP3.56□□□□□ -1.84
SCN1A-210ENST00000635776 CA1P00915 261 aaPredicted RBP3.56□□□□□ -1.84
SCN1A-210ENST00000635776 ZFP36P26651 326 aaKnown RBP3.56□□□□□ -1.84
SCN1A-210ENST00000635776 SRSF1Q07955 248 aaKnown RBP eCLIP3.56□□□□□ -1.84
SCN1A-210ENST00000635776 OR4X2Q8NGF9 303 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 TMSB15BA0A087X1C1 80 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 MORN5Q5VZ52 161 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 SPATA12Q7Z6I5 190 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 LYRM7Q5U5X0 104 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 JMJD8Q96S16 334 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 TRGV11A0A075B6L2 103 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 LY6EQ16553 131 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 WNK2Q9Y3S1 2297 aa3.56□□□□□ -1.84
SCN1A-210ENST00000635776 EREGO14944 169 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 SNRPCP09234 159 aaKnown RBP3.55□□□□□ -1.84
SCN1A-210ENST00000635776 LOXL1Q08397 574 aaPredicted RBP3.55□□□□□ -1.84
SCN1A-210ENST00000635776 SLAQ13239 276 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 RAX2Q96IS3 184 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 A6NDX4 124 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 HCFC1P51610 2035 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 GAGE1Q13065 139 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 C9orf47Q6ZRZ4 202 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 ZC2HC1AQ96GY0 325 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 CTRLP40313 264 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 SSBP4Q9BWG4 385 aaPredicted RBP3.55□□□□□ -1.84
SCN1A-210ENST00000635776 RHPN1-AS1Q9BWJ2 59 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 DPH3P1Q9H4G8 78 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 ACACAQ13085 2346 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 LGALS9BQ3B8N2 356 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 LGALS9CQ6DKI2 356 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 C8orf86Q6ZUL3 223 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 TRAV8-1A0A0A6YYK1 113 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 M0R381 172 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 Q6ZWC4 215 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 C20orf78Q9BR46 151 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 GVINP1Q7Z2Y8 2422 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV3-23P01764 117 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 ARMS2P0C7Q2 107 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 PRSS57Q6UWY2 283 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 BOD1L2Q8IYS8 172 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 ODF3Q96PU9 254 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV4-61A0A0C4DH41 118 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV7-4-1A0A0J9YVY3 117 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 CDPF1Q6NVV7 123 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 BCL6BQ8N143 479 aaPredicted RBP3.55□□□□□ -1.84
SCN1A-210ENST00000635776 WFDC12Q8WWY7 111 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 GOLT1BQ9Y3E0 138 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 SORL1Q92673 2214 aa3.55□□□□□ -1.84
SCN1A-210ENST00000635776 IGKV2-40A0A087WW87 121 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-210ENST00000635776 IGKV2D-40P01614 121 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-210ENST00000635776 MRGPRG-AS1Q2M3A8 158 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 SEC11AP67812 179 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 S4R3C0 116 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 D6R8Y8 96 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 Q8N8P6 123 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 IFI27L1Q96BM0 104 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 COL6A6A6NMZ7 2263 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 GTF2H5Q6ZYL4 71 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 RNF152Q8N8N0 203 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 DYNLRB2Q8TF09 96 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-210ENST00000635776 FCER1GP30273 86 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 361.9 ms