RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 PLA2G10O15496 165 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 LYRM1O43325 122 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 OR5I1Q13606 314 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 CLINT1Q14677 625 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 RNASE8Q8TDE3 154 aaKnown RBP8.84□□□□□ -0.99
PTPN11-206ENST00000635652 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 PXMP4Q9Y6I8 212 aa8.84□□□□□ -0.99
PTPN11-206ENST00000635652 TRAV5A0A0B4J249 113 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 FAM24AA6NFZ4 105 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 H3BQ15 152 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 TCRBP04435 133 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 IGLC2P0DOY2 106 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 PVALBP20472 110 aaPredicted RBP8.83□□□□□ -1
PTPN11-206ENST00000635652 GFI1BQ5VTD9 330 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 MIC13Q5XKP0 118 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 ZNF575Q86XF7 245 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 ZNRF2Q8NHG8 242 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 RNF141Q8WVD5 230 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 UQCC1Q9NVA1 299 aa8.83□□□□□ -1
PTPN11-206ENST00000635652 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 SNURFLB1AK76 121 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 S100A10P60903 97 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 BAXQ07812 192 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 GUK1Q16774 197 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 SSX7Q7RTT5 188 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 C12orf45Q8N5I9 185 aaPredicted RBP8.82□□□□□ -1
PTPN11-206ENST00000635652 ZNF431Q8TF32 576 aaPredicted RBP8.82□□□□□ -1
PTPN11-206ENST00000635652 SAT2Q96F10 170 aaPredicted RBP8.82□□□□□ -1
PTPN11-206ENST00000635652 C2orf50Q96LR7 162 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 PFDN5Q99471 154 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 SEC22CQ9BRL7 303 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 NUDT15Q9NV35 164 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
PTPN11-206ENST00000635652 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 TRAV26-1A0A087WT03 109 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 UBE2L5PA0A1B0GUS4 154 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GAGE12BA1L429 117 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GAGE7O76087 117 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 RLN2P04090 185 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GAGE12FP0CL80 117 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GAGE12GP0CL81 117 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GAGE12IP0CL82 117 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 CT45A10P0DMU9 189 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 LEPP41159 167 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 TNP2Q05952 138 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 C6orf223Q8N319 242 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
PTPN11-206ENST00000635652 WDR83OSQ9Y284 106 aa8.81□□□□□ -1
PTPN11-206ENST00000635652 A0A0J9YY99 117 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 H2AFB2P0C5Z0 115 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 M6PRP20645 277 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 S100A11P31949 105 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 RPL29P47914 159 aaKnown RBP8.8□□□□□ -1
PTPN11-206ENST00000635652 STX12Q86Y82 276 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
PTPN11-206ENST00000635652 IGSF23A1L1A6 192 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 SULT1A1P50225 295 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 HBG1P69891 147 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 HBG2P69892 147 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 TMEM252Q8N6L7 170 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 ODF3Q96PU9 254 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 PYGO2Q9BRQ0 406 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 C11orf1Q9H5F2 150 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 Q9H8V8 135 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 LYRM2Q9NU23 88 aaPredicted RBP8.79□□□□□ -1
PTPN11-206ENST00000635652 TIMM9Q9Y5J7 89 aa8.79□□□□□ -1
PTPN11-206ENST00000635652 APOBP04114 4563 aaKnown RBP8.78□□□□□ -1
PTPN11-206ENST00000635652 DNAH5Q8TE73 4624 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 FAM240BA0A1B0GVZ2 78 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 C16orf90A8MZG2 172 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 M0R3E3 92 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 HOXA5P20719 270 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 FGF7P21781 194 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 RAB32Q13637 225 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 VWC2Q2TAL6 325 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 LINC00612Q8N6U2 182 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 BLNKQ8WV28 456 aa8.78□□□□□ -1
PTPN11-206ENST00000635652 GPN1Q9HCN4 374 aaPredicted RBP8.78□□□□□ -1
PTPN11-206ENST00000635652 TRBV19A0A075B6N1 114 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 ZNF253O75346 499 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 SLC25A5P05141 298 aaKnown RBP8.77□□□□□ -1.01
PTPN11-206ENST00000635652 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1.01
PTPN11-206ENST00000635652 ERCC8Q13216 396 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 ATP6V1FQ16864 119 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 Q6ZTI0 123 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 MRPL53Q96EL3 112 aaKnown RBP8.77□□□□□ -1.01
PTPN11-206ENST00000635652 ZNF503Q96F45 646 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
PTPN11-206ENST00000635652 TRGV2A0A075B6R0 118 aa8.76□□□□□ -1.01
PTPN11-206ENST00000635652 C7orf71A4D174 169 aa8.76□□□□□ -1.01
PTPN11-206ENST00000635652 PYYP10082 97 aa8.76□□□□□ -1.01
PTPN11-206ENST00000635652 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
PTPN11-206ENST00000635652 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
PTPN11-206ENST00000635652 ESRGQ1W209 222 aa8.76□□□□□ -1.01
PTPN11-206ENST00000635652 MZT2BQ6NZ67 158 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms