RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 OR2T8A6NH00 312 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4C45A6NMZ5 311 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 A8MWP6 167 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LEUTXA8MZ59 168 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF670-ZNF695F2Z2N8 137 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 H0Y980 276 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 H3BP45 60 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 J3QLW9 94 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 M0R2Z0 102 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CASQ2O14958 399 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 BIRC5O15392 142 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 FGF16O43320 207 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 PSCAO43653 123 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SULT1B1O43704 296 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFS5O43920 106 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GMDSO60547 372 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2A4O95047 310 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFA3O95167 84 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 FADS2O95864 444 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 NAPSAO96009 420 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CST4P01036 141 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GCGP01275 180 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-39P01597 117 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-DRB1P01911 266 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1D-39P04432 117 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CSN2P05814 226 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RPSAP08865 295 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 HTR1AP08908 422 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SCTP09683 121 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SFTA3P0C7M3 94 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OCM2P0CE71 109 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OCMP0CE72 109 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 INAFM2P0DMQ5 153 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ALOX5APP20292 161 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 PMCHP20382 165 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GZMHP20718 246 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CCL1P22362 96 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 NFYAP23511 347 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CRHBPP24387 322 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 PSMA1P25786 263 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 BRS3P32247 399 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RPL27AP46776 148 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 DAPP51397 102 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF137PP52743 207 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 PCBD1P61457 104 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LSM6P62312 80 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RAB11AP62491 216 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GNGT1P63211 74 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SELENOWP63302 87 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TSPAN31Q12999 210 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MED21Q13503 144 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 HMGN3Q15651 99 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 USF2Q15853 346 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SPINK13Q1W4C9 94 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 C12orf74Q32Q52 190 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CEACAM21Q3KPI0 293 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 Q56UQ5 140 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 PSMG4Q5JS54 123 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ACTL10Q5JWF8 245 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CLVS2Q5SYC1 327 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SYT6Q5T7P8 510 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MINOS1Q5TGZ0 78 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM42Q69YG0 159 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 C12orf73Q69YU5 71 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 KDM4DQ6B0I6 523 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ERICH5Q6P6B1 374 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MORN3Q6PF18 240 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GLIPR1L1Q6UWM5 242 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 HEPN1Q6WQI6 88 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00322Q6ZN03 302 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 Q6ZRN7 208 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF833PQ6ZTB9 187 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RASSF6Q6ZTQ3 369 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM231DQ6ZW35 169 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SCXQ7RTU7 201 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SPATA24Q86W54 205 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LYPD6Q86Y78 171 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 AMN1Q8IY45 258 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CNPY4Q8N129 248 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TEX29Q8N6K0 151 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 WFDC9Q8NEX5 89 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR8J3Q8NGG0 315 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR51T1Q8NGJ9 327 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5H6Q8NGV6 325 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5H2Q8NGV7 314 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2T10Q8NGZ9 312 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2T4Q8NH00 348 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR11H2Q8NH07 326 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR51H1Q8NH63 302 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LGALS14Q8TCE9 139 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GNPDA2Q8TDQ7 276 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFB104AQ8WTQ1 72 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CANT1Q8WVQ1 401 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ASB17Q8WXJ9 295 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 BAALCQ8WXS3 180 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GPR146Q96CH1 333 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPS24Q96EL2 167 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ARHGAP5-AS1Q96IT6 56 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SMIM8Q96KF7 97 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2A7Q96R45 310 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms