RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF705FA8MVS1 300 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-209ENST00000635450 BOLA2-SMG1P6H3BVE0 249 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-209ENST00000635450 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-209ENST00000635450 OR10J6PQ8NGY7 276 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 NEU1Q99519 415 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 PAXXQ9BUH6 204 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 OR51M1Q9H341 326 aa11.23□□□□□ -0.61
LINC00339-209ENST00000635450 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-209ENST00000635450 M0R2Z0 102 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 OR7C2O60412 319 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 INSP01308 110 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 TAS2R45P59539 299 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
LINC00339-209ENST00000635450 A0A1W2PPV4 95 aa11.21□□□□□ -0.61
LINC00339-209ENST00000635450 HBE1P02100 147 aa11.21□□□□□ -0.61
LINC00339-209ENST00000635450 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
LINC00339-209ENST00000635450 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-209ENST00000635450 M6PRP20645 277 aa11.21□□□□□ -0.61
LINC00339-209ENST00000635450 KHDC3LQ587J8 217 aa11.21□□□□□ -0.61
LINC00339-209ENST00000635450 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
LINC00339-209ENST00000635450 OR10J4P0C629 311 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 HSD17B11Q8NBQ5 300 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 RNF141Q8WVD5 230 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 TNFSF18Q9UNG2 199 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 CELA1Q9UNI1 258 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
LINC00339-209ENST00000635450 BORCS7-ASMTA0A0B4J1R7 106 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 PRAC2D3DTV9 90 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 NDUFB4O95168 129 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 TSPOP30536 169 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 CDKN1BP46527 198 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 BAP18Q8IXM2 172 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 C1orf158Q8N1D5 194 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
LINC00339-209ENST00000635450 PSMG3Q9BT73 122 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-209ENST00000635450 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 M0R3E3 92 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-209ENST00000635450 ATP6V0CP27449 155 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 RAB2AP61019 212 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 UBE2L3P68036 154 aaKnown RBP11.18□□□□□ -0.62
LINC00339-209ENST00000635450 ICAM4Q14773 271 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 FAM122CQ6P4D5 195 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 Q6ZTC4 211 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
LINC00339-209ENST00000635450 ARPC5O15511 151 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 MBP02144 154 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 EMP1P54849 157 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 SERF2P84101 59 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 TMEM256Q8N2U0 113 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
LINC00339-209ENST00000635450 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 LEPP41159 167 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 RANP62826 216 aaKnown RBP11.16□□□□□ -0.62
LINC00339-209ENST00000635450 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-209ENST00000635450 ZNF503Q96F45 646 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 LINC01587Q99440 93 aa11.16□□□□□ -0.62
LINC00339-209ENST00000635450 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 G3V3Q6 166 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 TAAR5O14804 337 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 CSN1S1P47710 185 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 CDC34P49427 236 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-209ENST00000635450 RPL7L1Q6DKI1 246 aaKnown RBP11.15□□□□□ -0.62
LINC00339-209ENST00000635450 C2CD4CQ8TF44 421 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 PHYHIPLQ96FC7 376 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 APLNQ9ULZ1 77 aa11.15□□□□□ -0.62
LINC00339-209ENST00000635450 IGLL5B9A064 214 aa11.14□□□□□ -0.63
LINC00339-209ENST00000635450 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
LINC00339-209ENST00000635450 EIF3GO75821 320 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00339-209ENST00000635450 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
LINC00339-209ENST00000635450 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
LINC00339-209ENST00000635450 Q9H3A6 140 aa11.14□□□□□ -0.63
LINC00339-209ENST00000635450 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms