RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 MAP1LC3BQ9GZQ8 125 aa4.25□□□□□ -1.73
LINC00254-202ENST00000633813 SMDT1Q9H4I9 107 aa4.25□□□□□ -1.73
LINC00254-202ENST00000633813 SLC25A22Q9H936 323 aa4.25□□□□□ -1.73
LINC00254-202ENST00000633813 TECRQ9NZ01 308 aaKnown RBP4.25□□□□□ -1.73
LINC00254-202ENST00000633813 PEF1Q9UBV8 284 aaKnown RBP4.25□□□□□ -1.73
LINC00254-202ENST00000633813 RNF24Q9Y225 148 aa4.25□□□□□ -1.73
LINC00254-202ENST00000633813 HIVEP2P31629 2446 aa4.25□□□□□ -1.73
LINC00254-202ENST00000633813 ACANP16112 2415 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 HMGB3O15347 200 aaKnown RBP4.24□□□□□ -1.73
LINC00254-202ENST00000633813 GGCTO75223 188 aaKnown RBP4.24□□□□□ -1.73
LINC00254-202ENST00000633813 IL4P05112 153 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 TAGLN2P37802 199 aaKnown RBP4.24□□□□□ -1.73
LINC00254-202ENST00000633813 CDX1P47902 265 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-202ENST00000633813 PSMB3P49720 205 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 PPT1P50897 306 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 LYZP61626 148 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 KHDC3LQ587J8 217 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 UQCC3Q6UW78 93 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 C10orf99Q6UWK7 81 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 TOMM20LQ6UXN7 152 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 STXBP6Q8NFX7 210 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 OR5AU1Q8NGC0 362 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 OR4X2Q8NGF9 303 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 LINC00479Q96M42 142 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 PBDC1Q9BVG4 233 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 DOK5Q9P104 306 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 HIGD1AQ9Y241 93 aa4.24□□□□□ -1.73
LINC00254-202ENST00000633813 PUS1Q9Y606 427 aaKnown RBP eCLIP4.24□□□□□ -1.73
LINC00254-202ENST00000633813 A0A087X002 238 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 A0A1B0GUS0 222 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 A0A1B0GV50 99 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 RBFOX3A6NFN3 312 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 PPP5D1E7EU14 171 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 NDUFA4O00483 81 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 NDUFS6O75380 124 aaKnown RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 IFNA1P01562 189 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 IGHV3-11P01762 117 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 CD5P06127 495 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 ARL14EPLP0DKL9 152 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 FGF8P55075 233 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 PEA15Q15121 130 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 USF2Q15853 346 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 GUK1Q16774 197 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 FAM106AQ4KMX7 169 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 SPATA31B1PQ5VZV4 182 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 MIR17HGQ75NE6 70 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 GPHB5Q86YW7 130 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 MAPKAPK5-AS1Q8N8E1 139 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 OR4F5Q8NH21 305 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 PHLDA1Q8WV24 401 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 ZNF414Q96IQ9 312 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 FAM167A-AS1Q96KT0 104 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 TXNDC17Q9BRA2 123 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 SHANK2-AS3Q9BTD1 123 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 SCRT1Q9BWW7 348 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 SLC25A39Q9BZJ4 359 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 EIF5A2Q9GZV4 153 aaKnown RBP4.23□□□□□ -1.73
LINC00254-202ENST00000633813 OR51M1Q9H341 326 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 GNB4Q9HAV0 340 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 MANBALQ9NQG1 85 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 TMEM167BQ9NRX6 74 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 RABAC1Q9UI14 185 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 VAX2Q9UIW0 290 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 PYGO1Q9Y3Y4 419 aa4.23□□□□□ -1.73
LINC00254-202ENST00000633813 FLNBO75369 2602 aaKnown RBP4.22□□□□□ -1.73
LINC00254-202ENST00000633813 BAHCC1Q9P281 2608 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 TRAV5A0A0B4J249 113 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 IGHV3-35A0A0C4DH35 117 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 CLPSL1A2RUU4 121 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 ZNF98A6NK75 572 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 H3BRN7 92 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 I3L521 148 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 K7EMT4 169 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 OR7C2O60412 319 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 ATP6V1G1O75348 118 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 EIF3GO75821 320 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC00254-202ENST00000633813 TRBV12-3P01733 135 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 HSPB1P04792 205 aaKnown RBP4.22□□□□□ -1.73
LINC00254-202ENST00000633813 LGALS1P09382 135 aaKnown RBP4.22□□□□□ -1.73
LINC00254-202ENST00000633813 BCL2P10415 239 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 S100A1P23297 94 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 NPPCP23582 126 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 CRYBB3P26998 211 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 GCHFRP30047 84 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 RPEL1Q2QD12 228 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 TCTEX1D4Q5JR98 221 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 ZNF506Q5JVG8 444 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 C1orf194Q5T5A4 169 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 BPIFA4PQ86YQ2 179 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 IQCF2Q8IXL9 164 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 C4orf3Q8WVX3 66 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 OR5B12Q96R08 314 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 METTL26Q96S19 204 aa4.22□□□□□ -1.73
LINC00254-202ENST00000633813 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms