RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 STAG3L2P0CL84 134 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 STAG3L3P0CL85 134 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 MEOX2P50222 304 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 TAS2R45P59539 299 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 ZNF124Q15973 351 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 FAM74A3Q4VXF1 159 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 KHDC3LQ587J8 217 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 FAM213BQ8TBF2 198 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 C16orf92Q96LL3 132 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 EIF5A2Q9GZV4 153 aaKnown RBP13.81□□□□□ -0.2
PNKP-224ENST00000631020 TRBV19A0A075B6N1 114 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 ISLRO14498 428 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 NDUFB4O95168 129 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 NBEAP1P0C6P0 100 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 DEFB131AP59861 70 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 FLI1Q01543 452 aaPredicted RBP13.8□□□□□ -0.2
PNKP-224ENST00000631020 APRG1Q8IVJ8 170 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 DEFB125Q8N687 156 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 FAM110AQ9BQ89 295 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 ARL14EPLP0DKL9 152 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 HLA-DMBP28068 263 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 PQLC2Q6ZP29 291 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
PNKP-224ENST00000631020 ZNF331Q9NQX6 463 aaPredicted RBP13.8□□□□□ -0.2
PNKP-224ENST00000631020 H2AFB1P0C5Y9 115 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 PSMB3P49720 205 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 CMC4P56277 68 aaPredicted RBP13.79□□□□□ -0.2
PNKP-224ENST00000631020 SNRPD3P62318 126 aaKnown RBP13.79□□□□□ -0.2
PNKP-224ENST00000631020 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 LCN15Q6UWW0 184 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 MUC7Q8TAX7 377 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 TUBA4BQ9H853 241 aa13.79□□□□□ -0.2
PNKP-224ENST00000631020 ID1P41134 155 aa13.78□□□□□ -0.2
PNKP-224ENST00000631020 PPT1P50897 306 aa13.78□□□□□ -0.2
PNKP-224ENST00000631020 DEFB1P60022 68 aa13.78□□□□□ -0.2
PNKP-224ENST00000631020 UBE2L3P68036 154 aaKnown RBP13.78□□□□□ -0.2
PNKP-224ENST00000631020 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
PNKP-224ENST00000631020 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
PNKP-224ENST00000631020 GCHFRP30047 84 aa13.77□□□□□ -0.21
PNKP-224ENST00000631020 HAGHQ16775 308 aa13.77□□□□□ -0.21
PNKP-224ENST00000631020 SAMD13Q5VXD3 122 aa13.77□□□□□ -0.21
PNKP-224ENST00000631020 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
PNKP-224ENST00000631020 ZNF253O75346 499 aa13.76□□□□□ -0.21
PNKP-224ENST00000631020 CXorf1O96002 111 aa13.76□□□□□ -0.21
PNKP-224ENST00000631020 FGF8P55075 233 aaPredicted RBP13.76□□□□□ -0.21
PNKP-224ENST00000631020 PDE6HQ13956 83 aa13.76□□□□□ -0.21
PNKP-224ENST00000631020 LINC00322Q6ZN03 302 aaPredicted RBP13.76□□□□□ -0.21
PNKP-224ENST00000631020 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
PNKP-224ENST00000631020 SLC50A1Q9BRV3 221 aa13.76□□□□□ -0.21
PNKP-224ENST00000631020 MAP1LC3B2A6NCE7 125 aa13.75□□□□□ -0.21
PNKP-224ENST00000631020 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
PNKP-224ENST00000631020 MAP1LC3BQ9GZQ8 125 aa13.75□□□□□ -0.21
PNKP-224ENST00000631020 TMPRSS5Q9H3S3 457 aa13.75□□□□□ -0.21
PNKP-224ENST00000631020 SRD5A3Q9H8P0 318 aa13.75□□□□□ -0.21
PNKP-224ENST00000631020 KNCNA6PVL3 124 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 PSG3Q16557 428 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 EXOC3-AS1Q8N2X6 119 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 C15orf54Q8N8G6 183 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 SFT2D1Q8WV19 159 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 AGRNO00468 2067 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 RBMY1BA6NDE4 496 aaKnown RBP13.74□□□□□ -0.21
PNKP-224ENST00000631020 RBMY1EA6NEQ0 496 aaKnown RBP13.74□□□□□ -0.21
PNKP-224ENST00000631020 ZNF705FA8MVS1 300 aaPredicted RBP13.74□□□□□ -0.21
PNKP-224ENST00000631020 F6UB75 175 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 RBMY1DP0C7P1 496 aaKnown RBP13.74□□□□□ -0.21
PNKP-224ENST00000631020 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
PNKP-224ENST00000631020 RHEBQ15382 184 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 GDF5OSQ5U4N7 250 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 CBLN2Q8IUK8 224 aa13.74□□□□□ -0.21
PNKP-224ENST00000631020 RBFOX3A6NFN3 312 aa13.73□□□□□ -0.21
PNKP-224ENST00000631020 PSG9Q00887 426 aa13.73□□□□□ -0.21
PNKP-224ENST00000631020 CASC10Q5T4H9 136 aa13.73□□□□□ -0.21
PNKP-224ENST00000631020 EDA2RQ9HAV5 297 aa13.73□□□□□ -0.21
PNKP-224ENST00000631020 M0R3E3 92 aa13.72□□□□□ -0.21
PNKP-224ENST00000631020 ICAM4Q14773 271 aa13.72□□□□□ -0.21
PNKP-224ENST00000631020 ACTL10Q5JWF8 245 aa13.72□□□□□ -0.21
PNKP-224ENST00000631020 IQCF2Q8IXL9 164 aa13.72□□□□□ -0.21
PNKP-224ENST00000631020 RPS10P5Q9NQ39 176 aa13.72□□□□□ -0.21
PNKP-224ENST00000631020 TRAV1-1A0A0B4J248 108 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 A0A1B0GV50 99 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 PRAC2D3DTV9 90 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 M0R036 132 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 SOHLH1Q5JUK2 328 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 ZNF738Q8NE65 137 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 RPUSD4Q96CM3 377 aaKnown RBP13.71□□□□□ -0.21
PNKP-224ENST00000631020 Q9H3A6 140 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 SAV1Q9H4B6 383 aaPredicted RBP13.71□□□□□ -0.21
PNKP-224ENST00000631020 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
PNKP-224ENST00000631020 C9JQL5 133 aa13.7□□□□□ -0.22
PNKP-224ENST00000631020 ZNF705DP0CH99 300 aaPredicted RBP13.7□□□□□ -0.22
PNKP-224ENST00000631020 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
PNKP-224ENST00000631020 FOXI2Q6ZQN5 318 aa13.7□□□□□ -0.22
PNKP-224ENST00000631020 LYPD1Q8N2G4 141 aa13.7□□□□□ -0.22
PNKP-224ENST00000631020 CLEC5AQ9NY25 188 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms