RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 IGHV1-3A0A0C4DH29 117 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 H3BQ85 93 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 CGB3P0DN86 165 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 WBP1Q96G27 269 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 NABP1Q96AH0 204 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 A0A087X0K7 114 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 LY6DQ14210 128 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 SPATA31B1PQ5VZV4 182 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 OR11H6Q8NGC7 330 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 TMEM158Q8WZ71 300 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 FCN3O75636 299 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 CD55P08174 381 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 UBE2V1Q13404 147 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 RNF222A6NCQ9 220 aa10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 PPIFP30405 207 aaKnown RBP10.8□□□□□ -0.68
SYNGAP1-208ENST00000629380 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 SPXQ9BT56 116 aa10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 TLN2Q9Y4G6 2542 aa10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 RAI1Q7Z5J4 1906 aaPredicted RBP10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 NDUFS5O43920 106 aa10.79□□□□□ -0.68
SYNGAP1-208ENST00000629380 SCRT1Q9BWW7 348 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 F5H768 121 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 F8W1H4 67 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 ZNF124Q15973 351 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 BMPERQ8N8U9 685 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 HIVEP3Q5T1R4 2406 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 CGB7P0DN87 165 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 C1orf122Q6ZSJ8 110 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 ZNF319Q9P2F9 582 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 SRRM5B3KS81 715 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 H0YJW9 148 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 NDUFB8O95169 186 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 SLC25A16P16260 332 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 LINC00114Q6XXX2 140 aa10.78□□□□□ -0.68
SYNGAP1-208ENST00000629380 LOC105371267A0A1B0GV96 52 aa10.77□□□□□ -0.68
SYNGAP1-208ENST00000629380 LIME1Q9H400 295 aa10.77□□□□□ -0.68
SYNGAP1-208ENST00000629380 DEFB130BP0DP73 79 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 DEFB130AP0DP74 79 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 STPG4Q8N801 248 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 Q86TA4 180 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 IGHV1-46P01743 117 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 RNF126Q9BV68 326 aa10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 NDUFS6O75380 124 aaKnown RBP10.77□□□□□ -0.69
SYNGAP1-208ENST00000629380 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 TMEM178BH3BS89 294 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 A0A087WWL8 130 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 CD24P25063 80 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 CFPP27918 469 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 A6NNC1 897 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 DLEU1O43261 78 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 ZNF329Q86UD4 541 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 BUB1B-PAK6H3BSN5 160 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 TMEM200BQ69YZ2 307 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 IGHV1-18A0A0C4DH31 117 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
SYNGAP1-208ENST00000629380 TRAV25A0A0B4J276 109 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 PTPRSQ13332 1948 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 CITED1Q99966 193 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 WDR83OSQ9Y284 106 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 Q8TAT8 98 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 PFN1P07737 140 aaKnown RBP10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 hDV102S1A0JD36 115 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 ID3Q02535 119 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 FGF16O43320 207 aa10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYNGAP1-208ENST00000629380 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 NCOR1P1Q9H4R4 102 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 H3BUX3 64 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 TP53TG1Q9Y2A0 90 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 TEX48A0A1B0GUV7 120 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 HERVK_113P63121 156 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 CPAMD8Q8IZJ3 1885 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 SPRR3Q9UBC9 169 aa10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 DMRTC2Q8IXT2 367 aaPredicted RBP10.74□□□□□ -0.69
SYNGAP1-208ENST00000629380 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 NDPQ00604 133 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 SCRT2Q9NQ03 307 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 FXYD7P58549 80 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 TCF15Q12870 199 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 C11orf44Q8N8P7 122 aa10.73□□□□□ -0.69
SYNGAP1-208ENST00000629380 NBL1P41271 181 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms