RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 ZNF705FA8MVS1 300 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 TAGLN2P37802 199 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 MRPL53Q96EL3 112 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 VAX2Q9UIW0 290 aa13.16□□□□□ -0.3
SPTAN1-217ENST00000629089 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 KRTAP10-11P60412 298 aa13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 TOR2AQ5JU69 321 aa13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 RARRES2Q99969 163 aa13.15□□□□□ -0.3
SPTAN1-217ENST00000629089 GNG5P63218 68 aa13.14□□□□□ -0.31
SPTAN1-217ENST00000629089 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
SPTAN1-217ENST00000629089 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
SPTAN1-217ENST00000629089 PRR25Q96S07 402 aa13.14□□□□□ -0.31
SPTAN1-217ENST00000629089 TXNDC17Q9BRA2 123 aa13.14□□□□□ -0.31
SPTAN1-217ENST00000629089 DEFB1P60022 68 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 ZNF124Q15973 351 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 CCDC28AQ8IWP9 274 aa13.13□□□□□ -0.31
SPTAN1-217ENST00000629089 SORL1Q92673 2214 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 DIRC3C9JPN6 131 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 F6UB75 175 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 F6UZH7 168 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 TCEAL7Q9BRU2 100 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
SPTAN1-217ENST00000629089 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 PEX7O00628 323 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 PDE6DO43924 150 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 TCRAP04437 139 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 ZNF705DP0CH99 300 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 ZNF705BP0CI00 300 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 OR8A1Q8NGG7 326 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 HIST1H2BAQ96A08 127 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 ATG101Q9BSB4 218 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 SAV1Q9H4B6 383 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 PKD1L1Q8TDX9 2849 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 CMYA5Q8N3K9 4069 aa13.11□□□□□ -0.31
SPTAN1-217ENST00000629089 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
SPTAN1-217ENST00000629089 K7EQM0 130 aa13.1□□□□□ -0.31
SPTAN1-217ENST00000629089 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-217ENST00000629089 PEA15Q15121 130 aa13.1□□□□□ -0.31
SPTAN1-217ENST00000629089 GDF5OSQ5U4N7 250 aa13.1□□□□□ -0.31
SPTAN1-217ENST00000629089 A0A0J9YX75 114 aa13.09□□□□□ -0.31
SPTAN1-217ENST00000629089 SERTM2A0A1B0GWG4 89 aa13.09□□□□□ -0.31
SPTAN1-217ENST00000629089 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
SPTAN1-217ENST00000629089 CYB561D1Q8N8Q1 229 aa13.09□□□□□ -0.31
SPTAN1-217ENST00000629089 RAB19A4D1S5 217 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 AKR1C3P42330 323 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 STHQ8IWL8 128 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 Q8N1Y9 231 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 MED9Q9NWA0 146 aa13.08□□□□□ -0.31
SPTAN1-217ENST00000629089 RBAKDNA6NC62 111 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 LINC00862A6NCI5 91 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 HLA-DRB4P13762 266 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 ERCC8Q13216 396 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 KPRPQ5T749 579 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 COMMD7Q86VX2 200 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 VGLL1Q99990 258 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 HLA-DRB4X5D2U9 266 aa13.08□□□□□ -0.32
SPTAN1-217ENST00000629089 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 CNN1P51911 297 aaKnown RBP13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 CEBPGP53567 150 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 CITED4Q96RK1 184 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
SPTAN1-217ENST00000629089 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 H3BMM0 161 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 UBE2G1P62253 170 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 SRD5A3Q9H8P0 318 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 DNHD1Q96M86 4753 aa13.06□□□□□ -0.32
SPTAN1-217ENST00000629089 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
SPTAN1-217ENST00000629089 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
SPTAN1-217ENST00000629089 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms