RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 HTN3P15516 51 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 TAS2R60P59551 318 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 DEFA1P59665 94 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 DEFA3P59666 94 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 LRRC37A5PQ49AS3 106 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
SPTAN1-214ENST00000628614 PRB4P10163 310 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 NHLH2Q02577 135 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 POM121L12Q8N7R1 296 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 MARVELD1Q9BSK0 173 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 OR5AC2Q9NZP5 309 aa12.21□□□□□ -0.45
SPTAN1-214ENST00000628614 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
SPTAN1-214ENST00000628614 PRM2P04554 102 aa12.2□□□□□ -0.46
SPTAN1-214ENST00000628614 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
SPTAN1-214ENST00000628614 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
SPTAN1-214ENST00000628614 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
SPTAN1-214ENST00000628614 DNAH2Q9P225 4427 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 H7BYZ3 331 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 PDE6HQ13956 83 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 THAP6Q8TBB0 222 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 KCNIP2Q9NS61 270 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
SPTAN1-214ENST00000628614 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 PLAC8L1A1L4L8 177 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 H0YIZ8 118 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 SSNA1O43805 119 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 HIST1H1EP10412 219 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 HTN1P15515 57 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 AZU1P20160 251 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 H2BFSP57053 126 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 CLINT1Q14677 625 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 ZNF493Q6ZR52 646 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 PPP1R1CQ8WVI7 109 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 ODF3Q96PU9 254 aa12.18□□□□□ -0.46
SPTAN1-214ENST00000628614 NPIPB6E9PJ23 425 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 PET100P0DJ07 73 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 LEPP41159 167 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 TMEM88Q6PEY1 159 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 PRELID1Q9Y255 219 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 TIMM9Q9Y5J7 89 aa12.17□□□□□ -0.46
SPTAN1-214ENST00000628614 DEFB130BP0DP73 79 aa12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 DEFB130AP0DP74 79 aa12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 KIR3DS1Q14943 382 aa12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 C15orf53Q8NAA6 179 aa12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 PARD6GQ9BYG4 376 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 TIMM8BQ9Y5J9 83 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-214ENST00000628614 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 PYYP10082 97 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 BLNKQ8WV28 456 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 SLC25A2Q9BXI2 301 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 MRPL32Q9BYC8 188 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
SPTAN1-214ENST00000628614 M0R3E3 92 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 NDUFB4O95168 129 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 MPC2O95563 127 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 ATP5G1P05496 136 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 ATP5G3P48201 142 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 FCN2Q15485 313 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 ATP5SQ99766 215 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 FAT2Q9NYQ8 4349 aa12.14□□□□□ -0.47
SPTAN1-214ENST00000628614 CBY3A6NI87 242 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 J3KRW8 73 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 RNF212Q495C1 297 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
SPTAN1-214ENST00000628614 F5H768 121 aa12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 SLC25A5P05141 298 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 LINC00477Q96M19 166 aa12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 OR51M1Q9H341 326 aa12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-214ENST00000628614 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 EXOC3-AS1Q8N2X6 119 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 PAXXQ9BUH6 204 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
SPTAN1-214ENST00000628614 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 IFNA5P01569 189 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 ERCC8Q13216 396 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 ICAM4Q14773 271 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
SPTAN1-214ENST00000628614 MBD2Q9UBB5 411 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms