RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
PMS1-221ENST00000624204 SLC25A39Q9BZJ4 359 aaPredicted RBP12.03□□□□□ -0.48
PMS1-221ENST00000624204 LEPP41159 167 aa12.03□□□□□ -0.48
PMS1-221ENST00000624204 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
PMS1-221ENST00000624204 PHLDA1Q8WV24 401 aaPredicted RBP12.03□□□□□ -0.48
PMS1-221ENST00000624204 TRGV9Q99603 122 aa12.03□□□□□ -0.48
PMS1-221ENST00000624204 Q8TAT8 98 aa12.02□□□□□ -0.48
PMS1-221ENST00000624204 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.48
PMS1-221ENST00000624204 E9PLD3 99 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 GAS8-AS1O95177 125 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
PMS1-221ENST00000624204 CNTFRP26992 372 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 MC5RP33032 325 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 RELNP78509 3460 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 CCL11P51671 97 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 GAFA1Q96PS6 74 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 HIST1H4GQ99525 98 aa12.02□□□□□ -0.49
PMS1-221ENST00000624204 APOMO95445 188 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 IGKCP01834 107 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 Q6AWC8 147 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 ZNF833PQ6ZTB9 187 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 VMA21Q3ZAQ7 101 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 MSRB1Q9NZV6 116 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 SIT1Q9Y3P8 196 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 LOC107984156A0A0G2JMH3 177 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 C16orf97H3BN30 126 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 J3KRW8 73 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 ARL17AQ8IVW1 177 aa12.01□□□□□ -0.49
PMS1-221ENST00000624204 NDUFA3O95167 84 aa12□□□□□ -0.49
PMS1-221ENST00000624204 ODF1Q14990 250 aa12□□□□□ -0.49
PMS1-221ENST00000624204 SYT8Q8NBV8 401 aa12□□□□□ -0.49
PMS1-221ENST00000624204 H3BVH4 76 aa12□□□□□ -0.49
PMS1-221ENST00000624204 C12orf74Q32Q52 190 aa12□□□□□ -0.49
PMS1-221ENST00000624204 KLF17Q5JT82 389 aaPredicted RBP12□□□□□ -0.49
PMS1-221ENST00000624204 HIGD1BQ9P298 99 aa12□□□□□ -0.49
PMS1-221ENST00000624204 HHLA3Q9XRX5 114 aa12□□□□□ -0.49
PMS1-221ENST00000624204 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 LHBP01229 141 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 ZNF493Q6ZR52 646 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 CCL17Q92583 94 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
PMS1-221ENST00000624204 PLSCR4Q9NRQ2 329 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 TMEM8BA6NDV4 472 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 ORM1P02763 201 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
PMS1-221ENST00000624204 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 RASL11BQ9BPW5 248 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 IGHV3OR16-13A0A075B7E8 117 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 IGHV3-74A0A0B4J1X5 117 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 TRAV40A0A0B4J280 105 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 PRRG2O14669 202 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 SPRY2O43597 315 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
PMS1-221ENST00000624204 MRPL16Q9NX20 251 aaKnown RBP11.99□□□□□ -0.49
PMS1-221ENST00000624204 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
PMS1-221ENST00000624204 MDS2Q8NDY4 140 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 NGBQ9NPG2 151 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 TTC9CQ8N5M4 171 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 GLMPQ8WWB7 406 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 PTH2Q96A98 100 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 TNRC18O15417 2968 aaPredicted RBP11.98□□□□□ -0.49
PMS1-221ENST00000624204 IGKV2-40A0A087WW87 121 aaPredicted RBP11.98□□□□□ -0.49
PMS1-221ENST00000624204 INS-IGF2F8WCM5 200 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 SH2D1AO60880 128 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 IGKV2D-40P01614 121 aaPredicted RBP11.98□□□□□ -0.49
PMS1-221ENST00000624204 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 FER1L6-AS2Q96M78 137 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 TM2D2Q9BX73 214 aa11.98□□□□□ -0.49
PMS1-221ENST00000624204 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 DPM2O94777 84 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 CNIH1O95406 144 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 CRYGCP07315 174 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 SS18L2Q9UHA2 77 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 U3KQK5 164 aa11.97□□□□□ -0.49
PMS1-221ENST00000624204 IGLV2-23P01705 113 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 LRBAP50851 2863 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 TM4SF5O14894 197 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 COX7A1P24310 79 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 C8orf86Q6ZUL3 223 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 UFC1Q9Y3C8 167 aa11.96□□□□□ -0.49
PMS1-221ENST00000624204 IGLV1-44P01699 117 aa11.96□□□□□ -0.5
PMS1-221ENST00000624204 PAX8Q06710 450 aa11.96□□□□□ -0.5
PMS1-221ENST00000624204 SRSF6Q13247 344 aaKnown RBP11.96□□□□□ -0.5
PMS1-221ENST00000624204 LINC00312Q9Y6C7 94 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 304 ms