RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
LDB3-209ENST00000623056 CD40P25942 277 aa11.09□□□□□ -0.63
LDB3-209ENST00000623056 TNFRSF14Q92956 283 aa11.09□□□□□ -0.63
LDB3-209ENST00000623056 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
LDB3-209ENST00000623056 IGHV1-8P0DP01 117 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 LOXP28300 417 aaPredicted RBP11.08□□□□□ -0.64
LDB3-209ENST00000623056 NBL1P41271 181 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 SMAGPQ0VAQ4 97 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 ODF1Q14990 250 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 TWIST1Q15672 202 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 IGFL2Q6UWQ7 119 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 PPP1R27Q86WC6 154 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 BOD1L1Q8NFC6 3051 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
LDB3-209ENST00000623056 ZNF562Q6V9R5 426 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
LDB3-209ENST00000623056 C17orf100A8MU93 164 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 TMEM178BH3BS89 294 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 THBDP07204 575 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 ZNF491Q8N8L2 437 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
LDB3-209ENST00000623056 TSSC4Q9Y5U2 329 aaPredicted RBP11.07□□□□□ -0.64
LDB3-209ENST00000623056 MALRD1Q5VYJ5 2156 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 FBXL15Q9H469 300 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 FAM215AQ9Y5M1 114 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
LDB3-209ENST00000623056 ROS1P08922 2347 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 GVINP1Q7Z2Y8 2422 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 K7EIM0 57 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 IL4P05112 153 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
LDB3-209ENST00000623056 LEPP41159 167 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 DLX1P56177 255 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 FAM27E3Q08E93 113 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 CD300EQ496F6 205 aaPredicted RBP11.06□□□□□ -0.64
LDB3-209ENST00000623056 CEND1Q8N111 149 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 CCL17Q92583 94 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 SPANXB1Q9NS25 103 aaPredicted RBP11.06□□□□□ -0.64
LDB3-209ENST00000623056 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 K7EMI3 77 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 TNFRSF13BO14836 293 aaPredicted RBP11.06□□□□□ -0.64
LDB3-209ENST00000623056 CEACAM4O75871 244 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 PRB3Q04118 309 aaPredicted RBP11.06□□□□□ -0.64
LDB3-209ENST00000623056 WFDC2Q14508 124 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 NUP37Q8NFH4 326 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 TM2D2Q9BX73 214 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
LDB3-209ENST00000623056 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 DCHS1Q96JQ0 3298 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 A0A1W2PRD5 423 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 A0A1W2PRF3 423 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 A0A1W2PRM7 423 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 IGKCP01834 107 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 FCER1GP30273 86 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
LDB3-209ENST00000623056 IGKV2-40A0A087WW87 121 aaPredicted RBP11.04□□□□□ -0.64
LDB3-209ENST00000623056 IGHV1-3A0A0C4DH29 117 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 E9PLD3 99 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
LDB3-209ENST00000623056 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
LDB3-209ENST00000623056 PRSS1P07477 247 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 EVI2AP22794 236 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 ADIPOQQ15848 244 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 MSRB1Q9NZV6 116 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 IGLL5B9A064 214 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 F8W1H4 67 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 PDE6HQ13956 83 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 PLGLAQ15195 96 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
LDB3-209ENST00000623056 NDUFS8O00217 210 aa11.03□□□□□ -0.64
LDB3-209ENST00000623056 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
LDB3-209ENST00000623056 PRR25Q96S07 402 aa11.03□□□□□ -0.64
LDB3-209ENST00000623056 FOXC2Q99958 501 aa11.03□□□□□ -0.64
LDB3-209ENST00000623056 RP1L1Q8IWN7 2480 aaPredicted RBP11.03□□□□□ -0.64
LDB3-209ENST00000623056 DEFB109BQ30KR1 87 aa11.03□□□□□ -0.64
LDB3-209ENST00000623056 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
LDB3-209ENST00000623056 C16orf97H3BN30 126 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 J3QR89 54 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 DPM2O94777 84 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 ASCL5Q7RTU5 278 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 ZNF575Q86XF7 245 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 Q8TAT8 98 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.64
LDB3-209ENST00000623056 S4R3C0 116 aa11.02□□□□□ -0.64
LDB3-209ENST00000623056 TMEM8BA6NDV4 472 aa11.02□□□□□ -0.65
LDB3-209ENST00000623056 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms