RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 DLEU1O43261 78 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 LEPP41159 167 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 Q1RN00 199 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 BPESC1Q9GZL8 116 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 CCDC168Q8NDH2 2452 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 M0R1W7 72 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 TSPOP30536 169 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 MPV17L2Q567V2 206 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 IFI27L1Q96BM0 104 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 TMEM213A2RRL7 107 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 NDUFS7O75251 213 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 SRD5A1P18405 259 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 SLC50A1Q9BRV3 221 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 TNRC6AQ8NDV7 1962 aaKnown RBP10.22□□□□□ -0.77
MSH6-215ENST00000622629 COL5A1P20908 1838 aaPredicted RBP10.22□□□□□ -0.77
MSH6-215ENST00000622629 SAA4P35542 130 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 C8orf49Q96NF6 230 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 EFNA4P52798 201 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
MSH6-215ENST00000622629 EBLN2Q6P2I7 272 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 FAM159AQ6UWV7 190 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
MSH6-215ENST00000622629 MINOS1Q5TGZ0 78 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 WFDC12Q8WWY7 111 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 MINOS1-NBL1R4GNA1 71 aa10.21□□□□□ -0.77
MSH6-215ENST00000622629 ERCC8Q13216 396 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 A0A087X0K7 114 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 G3V318 75 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 IGLC2P0DOY2 106 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 IGLC3P0DOY3 106 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 PAX8Q06710 450 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.78
MSH6-215ENST00000622629 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
MSH6-215ENST00000622629 HERVK_113P61574 105 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 ZNF503Q96F45 646 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 ZNF492Q9P255 531 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 H3BVH4 76 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 FABP2P12104 132 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 PEF1Q9UBV8 284 aaKnown RBP10.2□□□□□ -0.78
MSH6-215ENST00000622629 OOSP1A8MZH6 123 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
MSH6-215ENST00000622629 GNLYP22749 145 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 ZC2HC1AQ96GY0 325 aa10.2□□□□□ -0.78
MSH6-215ENST00000622629 ASIPP42127 132 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 ZNF491Q8N8L2 437 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 SMIM12Q96EX1 92 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 NAA38Q9BRA0 125 aaKnown RBP10.19□□□□□ -0.78
MSH6-215ENST00000622629 SORL1Q92673 2214 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 TRAV41A0A0B4J266 112 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 VCX2Q9H322 139 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 TLN2Q9Y4G6 2542 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 USP9YO00507 2555 aaPredicted RBP10.19□□□□□ -0.78
MSH6-215ENST00000622629 ATP6V0E1O15342 81 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 IGLL1P15814 213 aa10.19□□□□□ -0.78
MSH6-215ENST00000622629 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
MSH6-215ENST00000622629 CT83Q5H943 113 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 DSCAMO60469 2012 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 LAMA1P25391 3075 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 OR11H12B2RN74 326 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 ATP5LO75964 103 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 NDUFA3O95167 84 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 PPBPP02775 128 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 OR11H2Q8NH07 326 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 NPFFO15130 113 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 IGF2-ASQ6U949 168 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 EPG5Q9HCE0 2579 aa10.18□□□□□ -0.78
MSH6-215ENST00000622629 A0A0G2JLM5 398 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 H3BUT2 72 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 PDE6HQ13956 83 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 OR1N2Q8NGR9 330 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 ZNF56Q15929 161 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 NXT2Q9NPJ8 142 aaKnown RBP10.17□□□□□ -0.78
MSH6-215ENST00000622629 H3BUX3 64 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 TGFAP01135 160 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
MSH6-215ENST00000622629 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
MSH6-215ENST00000622629 IGHV1-24A0A0C4DH33 117 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 LOC107984156A0A0G2JMH3 177 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 FAM231BA6NCW3 169 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 H3BRN7 92 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 HLA-DMBP28068 263 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 ARL17AQ8IVW1 177 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms