RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 SHANK2-AS3Q9BTD1 123 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 IGKV1-16P04430 117 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 U3KQE9 123 aa9.75□□□□□ -0.85
SLC6A6-210ENST00000622186 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 DEFB112Q30KQ8 113 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 NHLRC3Q5JS37 347 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 CHD3Q12873 2000 aaKnown RBP9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 OTOFQ9HC10 1997 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 A8MWP6 167 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 NUP35Q8NFH5 326 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 TCF20Q9UGU0 1960 aaKnown RBP9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 SHISA9B4DS77 424 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 GGNQ86UU5 652 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 NPBQ8NG41 125 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 SRSF8Q9BRL6 282 aaKnown RBP9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 A0A087X0K7 114 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 A0A087WW49 117 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 A0A1B0GX51 115 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 DYNAPQ8N1N2 210 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 SVIPQ8NHG7 77 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 ARID1AO14497 2285 aa9.74□□□□□ -0.85
SLC6A6-210ENST00000622186 GREM1O60565 184 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 Q5BKY6 102 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 TBX6O95947 436 aaPredicted RBP9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 INTS1Q8N201 2190 aaKnown RBP9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 PROP1O75360 226 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 SCN9AQ15858 1988 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 Q86TA4 180 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 EP300Q09472 2414 aaPredicted RBP9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 A0A1B0GUL6 1792 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 TRAV26-2A0A0B4J265 109 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 IFITM3Q01628 133 aa9.73□□□□□ -0.85
SLC6A6-210ENST00000622186 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 K7ERS5 55 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 RS1O15537 224 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 IGHV4-59P01825 116 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 ZNF134P52741 427 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 ABCA3Q99758 1704 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 SIGLEC8Q9NYZ4 499 aa9.72□□□□□ -0.85
SLC6A6-210ENST00000622186 IGKV1D-17A0A075B6S4 117 aa9.71□□□□□ -0.85
SLC6A6-210ENST00000622186 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.85
SLC6A6-210ENST00000622186 KIR3DS1Q14943 382 aa9.71□□□□□ -0.85
SLC6A6-210ENST00000622186 ORMDL1Q9P0S3 153 aa9.71□□□□□ -0.85
SLC6A6-210ENST00000622186 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 TMEM213A2RRL7 107 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 IGHG2P01859 326 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 PDE6HQ13956 83 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 AGMATQ9BSE5 352 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 INAFM1C9JVW0 142 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 TEX36Q5VZQ5 186 aa9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
SLC6A6-210ENST00000622186 IGLV3-32A0A0A0MS00 114 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 LAIR2Q6ISS4 152 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 SLURP1P55000 103 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 HRCT1Q6UXD1 115 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 C16orf74Q96GX8 76 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 IGKV1-27A0A075B6S5 117 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 A0A087WZ39 114 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 NPSP0C0P6 89 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 FOXI2Q6ZQN5 318 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 PRR25Q96S07 402 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 IGKV1-9A0A0C4DH69 117 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 COX7A2LO14548 114 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 VWCEQ96DN2 955 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 FAM110AQ9BQ89 295 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 MESP1Q9BRJ9 268 aa9.7□□□□□ -0.86
SLC6A6-210ENST00000622186 LTAP01374 205 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 FGF6P10767 208 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 CARD19Q96LW7 228 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 RTTNQ86VV8 2226 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 TJP1Q07157 1748 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 MLANAQ16655 118 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 TMEM75Q8N9X5 138 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 PRSS33Q8NF86 280 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 KLF2Q9Y5W3 355 aaPredicted RBP9.69□□□□□ -0.86
SLC6A6-210ENST00000622186 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
SLC6A6-210ENST00000622186 ADAMTSL5Q6ZMM2 481 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms