RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 hADV38S2A0JD32 116 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 C9JAW5 83 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 H7C1C5 153 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 ZNF682O95780 498 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 OR2H2O95918 312 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HLA-DRB1P01911 266 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 MT-ND4LP03901 98 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 SMIM10L2AP0DMW4 78 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 SMIM10L2BP0DMW5 78 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 RPL7P18124 248 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 RPS4Y1P22090 263 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HLA-DMBP28068 263 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HIST1H4AP62805 103 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 EIF5AP63241 154 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HIST1H1AQ02539 215 aaPredicted RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 RPL18Q07020 188 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HSD52Q0P140 79 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 NEDD8Q15843 81 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 FAM74A1Q5RGS3 127 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 Q5XG85 94 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 EIF5AL1Q6IS14 154 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 Q6ZS49 121 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 SVBPQ8N300 66 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 MMGT1Q8N4V1 131 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 SPACA4Q8TDM5 124 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 ADAT3Q96EY9 351 aaPredicted RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 OR2J1Q9GZK6 312 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 COMMD5Q9GZQ3 224 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 WDR61Q9GZS3 305 aaKnown RBP1.95□□□□□ -2.1
CPNE3-213ENST00000622183 LPAR5Q9H1C0 372 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 IL36BQ9NZH7 164 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 HIGD1AQ9Y241 93 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 TANC1Q9C0D5 1861 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 CUL9Q8IWT3 2517 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 UGGT1Q9NYU2 1555 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 DENND4CQ5VZ89 1909 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 LOC100130705A0A1B0GUX0 176 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM212A6NML5 194 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 EDF1O60869 148 aaKnown RBP1.94□□□□□ -2.1
CPNE3-213ENST00000622183 TNFP01375 233 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 IGHV3-7P01780 117 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 PRM2P04554 102 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 GPX1P07203 203 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 MSMBP08118 114 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 DEFA4P12838 97 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 DEFA3P59666 94 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 GNG5P63218 68 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 CCL20P78556 96 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 OR8I2Q8N0Y5 310 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM86AQ8N2M4 240 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM229BQ8NBD8 167 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-213ENST00000622183 OR8B12Q8NGG6 310 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 MRPL30Q8TCC3 161 aaKnown RBP1.94□□□□□ -2.1
CPNE3-213ENST00000622183 PRADC1Q9BSG0 188 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 PBDC1Q9BVG4 233 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 RTL8AQ9BWD3 113 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 OR2H1Q9GZK4 316 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 Q9H521 79 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 OR5AC2Q9NZP5 309 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 LAMTOR3Q9UHA4 124 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 MED31Q9Y3C7 131 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 ARHGAP5Q13017 1502 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 KDM3BQ7LBC6 1761 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 SCN11AQ9UI33 1791 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 PCNX2A6NKB5 2137 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 IQGAP3Q86VI3 1631 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD1P0DJD0 1748 aa1.94□□□□□ -2.1
CPNE3-213ENST00000622183 SUPT6HQ7KZ85 1726 aaKnown RBP1.94□□□□□ -2.1
CPNE3-213ENST00000622183 WIZO95785 1651 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 CITO14578 2027 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 TECPR2O15040 1411 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD4Q7Z3J3 1758 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 RBBP6Q7Z6E9 1792 aaKnown RBP1.93□□□□□ -2.1
CPNE3-213ENST00000622183 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 DLC1Q96QB1 1528 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 ARHGEF12Q9NZN5 1544 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 TRAV5A0A0B4J249 113 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 A0A0G2JMM0 328 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 A0A1W2PPB8 328 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 MEIS3P1A6NDR6 274 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 OR51F1A6NGY5 319 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 KIR3DP1A8MWS1 328 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 H7BYZ3 331 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 J3QR89 54 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 PGLYRP1O75594 196 aaPredicted RBP1.93□□□□□ -2.1
CPNE3-213ENST00000622183 NMBP08949 121 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 SLC38A11Q08AI6 406 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 C12orf74Q32Q52 190 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 IBA57Q5T440 356 aaKnown RBP1.93□□□□□ -2.1
CPNE3-213ENST00000622183 GLIPR1L1Q6UWM5 242 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 GKN2Q86XP6 184 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 HIST3H2BBQ8N257 126 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 TTC9CQ8N5M4 171 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 C5orf17Q8NAS9 161 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 OR8D4Q8NGM9 314 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 CT55Q8WUE5 264 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 SLAMF6Q96DU3 332 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 OR4C12Q96R67 309 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms