RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	C5orf64	Q2M2E5	130 aa		13.65	□□□□□ -0.22
FAM3A-222	ENST00000621967	EBLN2	Q6P2I7	272 aa		13.65	□□□□□ -0.22
FAM3A-222	ENST00000621967	RNASEK	Q6P5S7	137 aa	Known RBP	13.65	□□□□□ -0.22
FAM3A-222	ENST00000621967	PRNT	Q86SH4	94 aa		13.65	□□□□□ -0.22
FAM3A-222	ENST00000621967	C2orf70	A6NJV1	201 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	NPIPB5	A8MRT5	1133 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	HLA-DRB1	P01911	266 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	IGLC3	P0DOY3	106 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	PMCHL1	Q16048	86 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	FBLN7	Q53RD9	439 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967		Q71RC1	249 aa	Predicted RBP	13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	C17orf77	Q96MU5	243 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	CSPG4	Q6UVK1	2322 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	IGLV11-55	A0A075B6I3	123 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	TRAV30	A0A087WSZ9	112 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	HAX1	O00165	279 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	RPLP1	P05386	114 aa	Known RBP	13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	FANCD2OS	Q96PS1	177 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	UQCR10	Q9UDW1	63 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	ZFP30	Q9Y2G7	519 aa		13.64	□□□□□ -0.23
FAM3A-222	ENST00000621967	IL4	P05112	153 aa		13.63	□□□□□ -0.23
FAM3A-222	ENST00000621967	ZNF414	Q96IQ9	312 aa		13.63	□□□□□ -0.23
FAM3A-222	ENST00000621967	TLN2	Q9Y4G6	2542 aa		13.63	□□□□□ -0.23
FAM3A-222	ENST00000621967	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	CD5L	O43866	347 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	BTF3	P20290	206 aa	Known RBP	13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	FAM120AOS	Q5T036	256 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	CHCHD1	Q96BP2	118 aa	Known RBP	13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	ZC2HC1A	Q96GY0	325 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	NDFIP1	Q9BT67	221 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	CD24	P25063	80 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	PSG3	Q16557	428 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	KLF17	Q5JT82	389 aa	Predicted RBP	13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	LCN12	Q6JVE5	192 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	ZNF562	Q6V9R5	426 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967	KLHDC1	Q8N7A1	406 aa		13.62	□□□□□ -0.23
FAM3A-222	ENST00000621967		F8W735	103 aa	Predicted RBP	13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967		K7EQM0	130 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	PDE6H	Q13956	83 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	DMRTA1	Q5VZB9	504 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	TTC9C	Q8N5M4	171 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967		Q8N6K4	173 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	GATD1	Q8NB37	220 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	TMUB1	Q9BVT8	246 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	PSG8	Q9UQ74	426 aa		13.61	□□□□□ -0.23
FAM3A-222	ENST00000621967	TRAV40	A0A0B4J280	105 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	OOSP1	A8MZH6	123 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	GNG7	O60262	68 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	MFAP4	P55083	255 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	KRTAP1-1	Q07627	177 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	PRR31	Q5SQ13	230 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	CCDC144NL	Q6NUI1	221 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	S100A7A	Q86SG5	101 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	ARPC1A	Q92747	370 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	C1RL	Q9NZP8	487 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	SH2D7	A6NKC9	451 aa	Predicted RBP	13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	CHEK1	O14757	476 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	FCGR2B	P31994	310 aa	Predicted RBP	13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	NDP	Q00604	133 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	EBI3	Q14213	229 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967	HES1	Q14469	280 aa		13.6	□□□□□ -0.23
FAM3A-222	ENST00000621967		A0A1W2PRD5	423 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967		A0A1W2PRF3	423 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967		A0A1W2PRM7	423 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	C20orf202	A1L168	122 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	CRX	O43186	299 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	AVP	P01185	164 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	FOSL1	P15407	271 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	YAE1D1	Q9NRH1	226 aa		13.59	□□□□□ -0.23
FAM3A-222	ENST00000621967	IGHV3OR16-10	A0A075B7F0	116 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	TRAV9-2	A0A087WT02	112 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	IGHV1-24	A0A0C4DH33	117 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	UBE2E1	P51965	193 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	MINOS1	Q5TGZ0	78 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	ATOH7	Q8N100	152 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	BCL6B	Q8N143	479 aa	Predicted RBP	13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	DYNAP	Q8N1N2	210 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	SMR3A	Q99954	134 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	MINOS1-NBL1	R4GNA1	71 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967		S4R3C0	116 aa		13.58	□□□□□ -0.23
FAM3A-222	ENST00000621967	CENPVL3	A0A0U1RRI6	287 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967		A0A1B0GUT8	65 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967	CRIP1	P50238	77 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967		Q56UQ5	140 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967	SPATA12	Q7Z6I5	190 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967	TMEM70	Q9BUB7	260 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967	CLEC5A	Q9NY25	188 aa		13.58	□□□□□ -0.24
FAM3A-222	ENST00000621967	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967		M0QZ24	198 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967		M0R3E3	92 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	LINC00614	P0C842	121 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	IGHV4-38-2	P0DP08	117 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	MAJIN	Q3KP22	176 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	TXN2	Q99757	166 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	C21orf62	Q9NYP8	219 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	HIVEP1	P15822	2718 aa		13.57	□□□□□ -0.24
FAM3A-222	ENST00000621967	IGHV1-69D	A0A0B4J2H0	117 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967		A0A1B0GW15	77 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	SERTM2	A0A1B0GWG4	89 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	IGHV1-69	P01742	117 aa		13.56	□□□□□ -0.24

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