RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 LORP23490 312 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PSMA1P25786 263 aaKnown RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 FXYD4P59646 89 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 GNG2P59768 71 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PLP1P60201 277 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 HERV-K104P61576 105 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 POLR2GP62487 172 aaKnown RBP eCLIP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CACNG7P62955 275 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 NMSQ5H8A3 153 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 FAM162BQ5T6X4 162 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM91Q6ZNR0 172 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 ACOT7LQ6ZUV0 252 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 NIT1Q86X76 327 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 RNF182Q8N6D2 247 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PRR26Q8N8Z3 221 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM75Q8N9X5 138 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 NHLRC2Q8NBF2 726 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 OR4C5Q8NGB2 326 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 OR10P1Q8NGE3 313 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 OR52I2Q8NH67 350 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 LRRC20Q8TCA0 184 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM170AQ8WVE7 144 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CCDC124Q96CT7 223 aaKnown RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 ACY3Q96HD9 319 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 FAM19A4Q96LR4 140 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 SLC50A1Q9BRV3 221 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PRADC1Q9BSG0 188 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM222Q9H0R3 208 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CDIP1Q9H305 208 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 ACOT13Q9NPJ3 140 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 HEYLQ9NQ87 328 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF331Q9NQX6 463 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 LINC00474Q9P2X8 69 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PSORS1C1Q9UIG5 152 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CARHSP1Q9Y2V2 147 aaKnown RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 URGCP-MRPS24S4R325 110 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV6A0A075B6T7 132 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 LOC100131303A0A0U1RQF7 123 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 C7orf71A4D174 169 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 PGPA6NDG6 321 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 RGS13O14921 159 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF253O75346 499 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV1-5P01602 117 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 TCRBP04435 133 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SFTA3P0C7M3 94 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 GZMBP10144 247 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 CRISP2P16562 243 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 RPL13AP40429 203 aaKnown RBP1.43□□□□□ -2.18
CPNE3-211ENST00000621526 LYZP61626 148 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 RAB31Q13636 194 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 OPCMLQ14982 345 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SPHARQ15513 63 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 RHOHQ15669 191 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 TPRXLQ17RH7 258 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SPINK9Q5DT21 86 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 LCE2CQ5TA81 110 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 DMRTA1Q5VZB9 504 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 ENHOQ6UWT2 76 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 PRSS48Q7RTY5 328 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 TBC1D26Q86UD7 250 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM17Q86X19 198 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 CYB561D1Q8N8Q1 229 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SLC25A29Q8N8R3 303 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 FER1L6-AS1Q8NA97 138 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 INO80EQ8NBZ0 244 aaPredicted RBP1.43□□□□□ -2.18
CPNE3-211ENST00000621526 OR4D10Q8NGI6 311 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 OR1S1Q8NH92 325 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 MARCH1Q8TCQ1 289 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 NUDCD2Q8WVJ2 157 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 DIRC1Q969H9 104 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 PTH2Q96A98 100 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 MRGPRFQ96AM1 343 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 UBE2WQ96B02 151 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF486Q96H40 463 aaPredicted RBP1.43□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF2Q9BSG1 426 aaPredicted RBP1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SHANK2-AS3Q9BTD1 123 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM147Q9BVK8 224 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 C1orf43Q9BWL3 253 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SLC25A22Q9H936 323 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 MRPL16Q9NX20 251 aaKnown RBP1.43□□□□□ -2.18
CPNE3-211ENST00000621526 HSPB7Q9UBY9 170 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 KLK12Q9UKR0 248 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 SSR3Q9UNL2 185 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 USH2AO75445 5202 aa1.43□□□□□ -2.18
CPNE3-211ENST00000621526 A0A087WX48 190 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 FBLL1A6NHQ2 334 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 PMS2P5A8MQ11 134 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 PRAC2D3DTV9 90 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 H3BRN7 92 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 M0R2P5 195 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MYL12BO14950 172 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MRPS12O15235 138 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 GYG2O15488 501 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 NDUFS6O75380 124 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 HYPMO75409 117 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 CDS2O95674 445 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 SLPIP03973 132 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 GPX1P07203 203 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MGST1P10620 155 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 ORM2P19652 201 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms