RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 MOB4Q9Y3A3 225 aa16.56■□□□□ 0.24
LIME1-210ENST00000621325 TRBV9A0A0B4J1U6 114 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 AVPP01185 164 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 CLEC3BP05452 202 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 UQCR10Q9UDW1 63 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 LY6EQ16553 131 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 HIF1ANQ9NWT6 349 aa16.55■□□□□ 0.24
LIME1-210ENST00000621325 M0R3E3 92 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 Q86TA4 180 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 SMIM12Q96EX1 92 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 CCDC140Q96MF4 163 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 MEGF9Q9H1U4 602 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 IGLC3P0DOY3 106 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 LINC00310P59036 64 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 CSPG4Q6UVK1 2322 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 PRNTQ86SH4 94 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 CIARTQ8N365 385 aaPredicted RBP16.54■□□□□ 0.24
LIME1-210ENST00000621325 GRAMD2BQ96HH9 432 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 TP53TG3Q9ULZ0 132 aa16.54■□□□□ 0.24
LIME1-210ENST00000621325 KLK9Q2XQG4 91 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 TMEM136Q6ZRR5 245 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 KLK9Q9UKQ9 250 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 TPPP2P59282 170 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 OR4B1Q8NGF8 309 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 GNB1LQ9BYB4 327 aa16.53■□□□□ 0.24
LIME1-210ENST00000621325 PTPN13Q12923 2485 aa16.52■□□□□ 0.24
LIME1-210ENST00000621325 ANKRD17O75179 2603 aaKnown RBP16.52■□□□□ 0.24
LIME1-210ENST00000621325 IZUMO1RA6ND01 250 aa16.52■□□□□ 0.24
LIME1-210ENST00000621325 COX6B1P14854 86 aa16.52■□□□□ 0.24
LIME1-210ENST00000621325 CLEC19AQ6UXS0 136 aa16.52■□□□□ 0.24
LIME1-210ENST00000621325 NAT8BQ9UHF3 227 aa16.52■□□□□ 0.24
LIME1-210ENST00000621325 NUP35Q8NFH5 326 aa16.51■□□□□ 0.23
LIME1-210ENST00000621325 RABAC1Q9UI14 185 aa16.51■□□□□ 0.23
LIME1-210ENST00000621325 B4DSR2 109 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 H3BUX3 64 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 KIAA1644Q3SXP7 199 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 Q8N976 141 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 GNB4Q9HAV0 340 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 TRAV41A0A0B4J266 112 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 C19orf71A6NCJ1 209 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 SCGB2A1O75556 95 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 LYPD1Q8N2G4 141 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 TSKUQ8WUA8 353 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 PRSS22Q9GZN4 317 aa16.5■□□□□ 0.23
LIME1-210ENST00000621325 ZNF785A8K8V0 405 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 HIGD1CA8MV81 97 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 C19orf54Q5BKX5 351 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 PRSS57Q6UWY2 283 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 SMAD5-AS1Q9Y6J3 95 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 A6NJY4 79 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 F2Z2F3 143 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 TCF24Q7RTU0 167 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 MAPK1IP1LQ8NDC0 245 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 RPP21Q9H633 154 aaKnown RBP16.49■□□□□ 0.23
LIME1-210ENST00000621325 ZFAND3Q9H8U3 227 aa16.49■□□□□ 0.23
LIME1-210ENST00000621325 DIRC3C9JPN6 131 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 SAP30O75446 220 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 SERF1AO75920 110 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 CRISP2P16562 243 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 COL8A1P27658 744 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 KRTDAPP60985 99 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 PAFAH1B2P68402 229 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 K7ERU9 68 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 RPL7P18124 248 aaKnown RBP16.48■□□□□ 0.23
LIME1-210ENST00000621325 GDF5OSQ5U4N7 250 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 IGFL4Q6B9Z1 124 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 WDR73Q6P4I2 378 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 ZNF492Q9P255 531 aa16.48■□□□□ 0.23
LIME1-210ENST00000621325 BMPR1BO00238 502 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 P01737 135 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 TSPOP30536 169 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 DSCR9P59020 149 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 KRTAP10-9P60411 292 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 PDE6HQ13956 83 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 PRR31Q5SQ13 230 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 TMEM75Q8N9X5 138 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 EEF1AKMT3Q96AZ1 226 aa16.47■□□□□ 0.23
LIME1-210ENST00000621325 ABCA12Q86UK0 2595 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 IGHV3-66A0A0C4DH42 116 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 A6NDX4 124 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 MT-ND6P03923 174 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 PSG3Q16557 428 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 Q6ZS46 218 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 GTSF1Q8WW33 167 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 ZC2HC1AQ96GY0 325 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 AAMDCQ9H7C9 122 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 PSG8Q9UQ74 426 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 ZANQ9Y493 2812 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 A0A096LNT2 108 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 CLPSL1A2RUU4 121 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 BLCAPP62952 87 aa16.46■□□□□ 0.23
LIME1-210ENST00000621325 ZNF331Q9NQX6 463 aaPredicted RBP16.46■□□□□ 0.23
LIME1-210ENST00000621325 IGHV3OR16-13A0A075B7E8 117 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 IGHV3-74A0A0B4J1X5 117 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 SLAQ13239 276 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 DAZAP1Q96EP5 407 aaKnown RBP16.45■□□□□ 0.22
LIME1-210ENST00000621325 SLC25A16P16260 332 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 HLA-DMBP28068 263 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 ATP5G2Q06055 141 aa16.45■□□□□ 0.22
LIME1-210ENST00000621325 TRBV6-1A0A0K0K1D8 114 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms