RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 NPFFR1Q9GZQ6 430 aa13.65□□□□□ -0.22
SLC39A1-211ENST00000621013 IGKV2-40A0A087WW87 121 aaPredicted RBP13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 IGKV2D-40P01614 121 aaPredicted RBP13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 ANKRD39Q53RE8 183 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 TMEM97Q5BJF2 176 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 AMMECR1LQ6DCA0 310 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 IGLC6P0CF74 106 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 BMI1P35226 326 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 THYN1Q9P016 225 aa13.64□□□□□ -0.23
SLC39A1-211ENST00000621013 EGR2P11161 476 aaPredicted RBP13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 PRTN3P24158 256 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 FOXE3Q13461 319 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 HES1Q14469 280 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 C21orf62-AS1Q17RA5 79 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 DMXL1Q9Y485 3027 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 LAMA5O15230 3695 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 SCGB2A1O75556 95 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 NHLH1Q02575 133 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 KLRD1Q13241 179 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 FER1L6-AS1Q8NA97 138 aa13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
SLC39A1-211ENST00000621013 NDPQ00604 133 aa13.62□□□□□ -0.23
SLC39A1-211ENST00000621013 FBXL19-AS1Q494R0 122 aa13.62□□□□□ -0.23
SLC39A1-211ENST00000621013 PCNX1Q96RV3 2341 aa13.62□□□□□ -0.23
SLC39A1-211ENST00000621013 Q8N6K4 173 aa13.62□□□□□ -0.23
SLC39A1-211ENST00000621013 TRAV8-6A0A0B4J262 113 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 C7orf71A4D174 169 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 IGHG4P01861 327 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CKS2P33552 79 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CACNG7P62955 275 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CCDC144NLQ6NUI1 221 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 OR9G4Q8NGQ1 327 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 TIMD4Q96H15 378 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CST9LQ9H4G1 147 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 SIVA1O15304 175 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 SNAI2O43623 268 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 NPYP01303 97 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 PPBPP02775 128 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CTSGP08311 255 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 ZNF80P51504 273 aaPredicted RBP13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 TCF15Q12870 199 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 TWIST1Q15672 202 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 CNFNQ9BYD5 112 aa13.61□□□□□ -0.23
SLC39A1-211ENST00000621013 LINC01546A6NGU7 62 aa13.6□□□□□ -0.23
SLC39A1-211ENST00000621013 S100A7P31151 101 aa13.6□□□□□ -0.23
SLC39A1-211ENST00000621013 EBI3Q14213 229 aa13.6□□□□□ -0.23
SLC39A1-211ENST00000621013 ZNF575Q86XF7 245 aa13.6□□□□□ -0.23
SLC39A1-211ENST00000621013 VGLL1Q99990 258 aa13.6□□□□□ -0.23
SLC39A1-211ENST00000621013 OOSP1A8MZH6 123 aa13.59□□□□□ -0.23
SLC39A1-211ENST00000621013 SMAD7O15105 426 aaKnown RBP13.59□□□□□ -0.23
SLC39A1-211ENST00000621013 Q8TAT8 98 aa13.59□□□□□ -0.23
SLC39A1-211ENST00000621013 C1orf122Q6ZSJ8 110 aa13.58□□□□□ -0.23
SLC39A1-211ENST00000621013 AKAP13Q12802 2813 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 ZZEF1O43149 2961 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 A6NDN8 102 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 NCBP2LA6PVI3 153 aaKnown RBP13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 SMKR1H3BMG3 65 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 H3BRM9 83 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 HSD52Q0P140 79 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 RNF185Q96GF1 192 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 APC2O95996 2303 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.24
SLC39A1-211ENST00000621013 FAM90A27PA6NNH2 459 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 NDUFS7O75251 213 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 VMO1Q7Z5L0 202 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 OR4X2Q8NGF9 303 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 A0A1W2PRD5 423 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 A0A1W2PRF3 423 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 A0A1W2PRM7 423 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 A1L4Q6 167 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 LY6HO94772 140 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 GRNP28799 593 aaKnown RBP13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 FXYD7P58549 80 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 MINOS1Q5TGZ0 78 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 DYNAPQ8N1N2 210 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 PIFOQ8TCI5 191 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 MINOS1-NBL1R4GNA1 71 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 POLEQ07864 2286 aa13.57□□□□□ -0.24
SLC39A1-211ENST00000621013 FABP5P3A8MUU1 101 aa13.56□□□□□ -0.24
SLC39A1-211ENST00000621013 PSMG4Q5JS54 123 aa13.56□□□□□ -0.24
SLC39A1-211ENST00000621013 ADAMTSL5Q6ZMM2 481 aa13.56□□□□□ -0.24
SLC39A1-211ENST00000621013 HLA-DMBP28068 263 aa13.56□□□□□ -0.24
SLC39A1-211ENST00000621013 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
SLC39A1-211ENST00000621013 KALRNO60229 2985 aa13.55□□□□□ -0.24
SLC39A1-211ENST00000621013 IGHV7-81A0A0B4J1V7 117 aa13.55□□□□□ -0.24
SLC39A1-211ENST00000621013 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
SLC39A1-211ENST00000621013 RBAKDNA6NC62 111 aa13.55□□□□□ -0.24
SLC39A1-211ENST00000621013 C9orf118A6NHY6 69 aa13.55□□□□□ -0.24
SLC39A1-211ENST00000621013 KLK9Q2XQG4 91 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms