RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DNLZQ5SXM8 178 aa6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 CBY1Q9Y3M2 126 aa6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 TBL2Q9Y4P3 447 aaKnown RBP6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 TET2Q6N021 2002 aaPredicted RBP6.67□□□□□ -1.34
PTPDC1-204ENST00000620992 ERASQ7Z444 233 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 BUB1B-PAK6H3BSN5 160 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 RAB9AP51151 201 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 TMEM30BQ3MIR4 351 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 CFAP47Q6ZTR5 3102 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 TRGV1A0A0A0MS02 117 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 FOXL1Q12952 345 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 TMEM95Q3KNT9 176 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 LINC00479Q96M42 142 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 EREGO14944 169 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
PTPDC1-204ENST00000620992 A0A1B0GUT8 65 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 M0QZK8 103 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 NCR2O95944 276 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 PRCDQ00LT1 54 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 CACNG8Q8WXS5 425 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 TMEM8BA6NDV4 472 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 HLA-DQA1P01909 254 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 DEFB131AP59861 70 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 PRELID3AQ96N28 172 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 HIST1H4GQ99525 98 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 SIGLEC9Q9Y336 463 aa6.65□□□□□ -1.34
PTPDC1-204ENST00000620992 SERF1AO75920 110 aa6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 APOHP02749 345 aaPredicted RBP6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 FRMD6-AS1P0C7T7 363 aa6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 CIARTQ8N365 385 aaPredicted RBP6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 LINC01356Q8N9X3 169 aa6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 RHPN1-AS1Q9BWJ2 59 aa6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 IL36BQ9NZH7 164 aa6.65□□□□□ -1.35
PTPDC1-204ENST00000620992 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A087WX48 190 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 K7EN84 100 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 DEFB136Q30KP8 78 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 AKAP13Q12802 2813 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 ATP6V0E1O15342 81 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 IGLV1-44P01699 117 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 ASPHD1Q5U4P2 390 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 MRPL32Q9BYC8 188 aaKnown RBP6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A1B0GV72 72 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 FAM90A9PA6NNJ1 464 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 H0YJW9 148 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 HBBP68871 147 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 PSG8Q9UQ74 426 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 MGAQ8IWI9 3026 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 PRTN3P24158 256 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 C17orf58Q2M2W7 97 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 C19orf24Q9BVV8 132 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 ZFP30Q9Y2G7 519 aa6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 POLR3KQ9Y2Y1 108 aaPredicted RBP6.64□□□□□ -1.35
PTPDC1-204ENST00000620992 F2Z2F3 143 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 J3QR89 54 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 NDUFA3O95167 84 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 COX19Q49B96 90 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 UBE2DNLQ8IWF7 75 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 PRSS46E5RG02 174 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 M0R143 59 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 SIGLEC15Q6ZMC9 328 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 SLC25A48Q6ZT89 311 aaKnown RBP6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 PHLDA1Q8WV24 401 aaPredicted RBP6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 C2orf88Q9BSF0 95 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 COL27A1Q8IZC6 1860 aaPredicted RBP6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 GUSBP1Q15486 140 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 OR10AG1Q8NH19 301 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 TMEM14BQ9NUH8 114 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 DKK4Q9UBT3 224 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A087WWL8 130 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A096LPF7 62 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 APOMO95445 188 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 CACNG7P62955 275 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 C1orf159Q96HA4 380 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 C22orf46C9J442 243 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV4-59P01825 116 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 CEACAM8P31997 349 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 ZNF124Q15973 351 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms