RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SIGLEC8Q9NYZ4 499 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 A0A0B4J2C4 111 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 TIAF1O95411 115 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 RNF166Q96A37 237 aaPredicted RBP5.87□□□□□ -1.47
COLCA1-205ENST00000620864 IMMP1LQ96LU5 166 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 COX6A1P12074 109 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 FUSP35637 526 aaKnown RBP eCLIP5.87□□□□□ -1.47
COLCA1-205ENST00000620864 SRXN1Q9BYN0 137 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 DEPPQ9NTK1 212 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 ZNF319Q9P2F9 582 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 SCN10AQ9Y5Y9 1956 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV2OR16-5A0A0B4J2B6 119 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 ATP6V0E2Q8NHE4 81 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 C18orf32Q8TCD1 76 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 NDUFB8O95169 186 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 YPEL3P61236 119 aaPredicted RBP5.86□□□□□ -1.47
COLCA1-205ENST00000620864 HERVK_113P63121 156 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 NMSQ5H8A3 153 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 RMI2Q96E14 147 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 TRAV40A0A0B4J280 105 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 F8VRH5 84 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 RPL35AP18077 110 aaKnown RBP5.86□□□□□ -1.47
COLCA1-205ENST00000620864 C8orf86Q6ZUL3 223 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 C1QL2Q7Z5L3 287 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 Q86TA4 180 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 IGKV1-8A0A0C4DH67 115 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 H0YGX0 51 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 CTSBP07858 339 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 GATA2P23769 480 aaPredicted RBP5.86□□□□□ -1.47
COLCA1-205ENST00000620864 RPP25LQ8N5L8 163 aaKnown RBP5.86□□□□□ -1.47
COLCA1-205ENST00000620864 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 RNF223E7ERA6 249 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 FAM104BQ5XKR9 115 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 PYGO2Q9BRQ0 406 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 WNT2P09544 360 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 CCL3L1P16619 93 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
COLCA1-205ENST00000620864 C10orf91Q5T1B1 145 aa5.86□□□□□ -1.47
COLCA1-205ENST00000620864 A0A1W2PPI3 338 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 C17orf100A8MU93 164 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 ZNF329Q86UD4 541 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV3OR16-8A0A075B7F1 116 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV2-70DA0A0C4DH43 119 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 LRRC37AA6NMS7 1700 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 PMS2P5A8MQ11 134 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 C1orf159Q96HA4 380 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 MESP1Q9BRJ9 268 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 J3QRE1 110 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 PDE6GP18545 87 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 HGFACQ04756 655 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 EIF4EBP2Q13542 120 aaPredicted RBP5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SCRT1Q9BWW7 348 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 PLXNA2O75051 1894 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 DOCK4Q8N1I0 1966 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 TRBV25-1A0A075B6N4 114 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 hADV29S1A0JD25 119 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 PLXNA3P51805 1871 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SRRM4A7MD48 611 aaKnown RBP5.85□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV2-5P01817 119 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SEC61GP60059 68 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 HS3ST6Q96QI5 342 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 MED12Q93074 2177 aa5.85□□□□□ -1.47
COLCA1-205ENST00000620864 SBF1O95248 1867 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 CD55P08174 381 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 ZNF843Q8N446 348 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 IGKV1D-13A0A0B4J2D9 117 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 H3BMG7 143 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 NTN3O00634 580 aaPredicted RBP5.84□□□□□ -1.47
COLCA1-205ENST00000620864 CLPSP04118 112 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 CECR9P0C854 216 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 IGKV1-13P0DP09 117 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 FANCMQ8IYD8 2048 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 IGKV2-40A0A087WW87 121 aaPredicted RBP5.84□□□□□ -1.47
COLCA1-205ENST00000620864 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 IGKV2D-40P01614 121 aaPredicted RBP5.84□□□□□ -1.47
COLCA1-205ENST00000620864 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 LRRK1Q38SD2 2015 aa5.84□□□□□ -1.47
COLCA1-205ENST00000620864 PSMB8P28062 276 aa5.84□□□□□ -1.48
COLCA1-205ENST00000620864 DEFB125Q8N687 156 aa5.84□□□□□ -1.48
COLCA1-205ENST00000620864 NDUFA12Q9UI09 145 aa5.84□□□□□ -1.48
COLCA1-205ENST00000620864 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 TMEM131Q92545 1883 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 TRGV1A0A0A0MS02 117 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 PFN1P07737 140 aaKnown RBP5.83□□□□□ -1.48
COLCA1-205ENST00000620864 MORN5Q5VZ52 161 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 IGLV3-32A0A0A0MS00 114 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 CFC1BP0CG36 223 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 CFC1P0CG37 223 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 C12orf74Q32Q52 190 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 WBP1Q96G27 269 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 SCRT2Q9NQ03 307 aa5.83□□□□□ -1.48
COLCA1-205ENST00000620864 PPIFP30405 207 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms