RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TRAV8-2A0A0B4J237 113 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 A8MWP6 167 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TCF21O43680 179 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 CRLF1O75462 422 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 LTAP01374 205 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IGLV2-11P01706 119 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 HLA-DMBP28068 263 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 KLF5Q13887 457 aaPredicted RBP6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ELOBQ15370 118 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PSG3Q16557 428 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 KHDC1LQ5JSQ8 128 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IGFL4Q6B9Z1 124 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 KCNIP4Q6PIL6 250 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 C16orf92Q96LL3 132 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 MLST8Q9BVC4 326 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZFP30Q9Y2G7 519 aa6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SVEP1Q4LDE5 3571 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TMEM213A2RRL7 107 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 GATCO43716 136 aaKnown RBP6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 CD28P10747 220 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RAB5AP20339 215 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FASNP49327 2511 aaKnown RBP6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SYNJ2BPP57105 145 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FOXL1Q12952 345 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IBA57Q5T440 356 aaKnown RBP6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 XP32Q5T750 250 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TCF24Q7RTU0 167 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 Q86TA4 180 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TMEM183AQ8IXX5 376 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 KLHL30-AS1Q8NEE0 82 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 OR11H1Q8NG94 326 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IL36BQ9NZH7 164 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TSSC4Q9Y5U2 329 aaPredicted RBP6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 URGCP-MRPS24S4R325 110 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
CNTNAP3B-213ENST00000617848 CENPEQ02224 2701 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZNF469Q96JG9 3925 aaPredicted RBP6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TRBV24-1A0A075B6N3 115 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TGIF2-C20orf24A0A0A6YYL0 155 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RBAKDNA6NC62 111 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZNF705FA8MVS1 300 aaPredicted RBP6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 M0QZ24 198 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 CXCL1P09341 107 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FOLR2P14207 255 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ID1P41134 155 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SLURP1P55000 103 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RPL11P62913 178 aaKnown RBP6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SAPCD1Q5SSQ6 148 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SAMD13Q5VXD3 122 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 Q8N3U1 123 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RNF182Q8N6D2 247 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 NUDT10Q8NFP7 164 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 NUDT11Q96G61 164 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 BTF3L4Q96K17 158 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FAM210BQ96KR6 192 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PYGO2Q9BRQ0 406 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RNASE7Q9H1E1 156 aaKnown RBP6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 MLXQ9UH92 298 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 V9GYV3 84 aa6.62□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IGKV2-40A0A087WW87 121 aaPredicted RBP6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 C2orf70A6NJV1 201 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZNF705GA8MUZ8 300 aaPredicted RBP6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PRAC2D3DTV9 90 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 SOCS3O14543 225 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 OVOL1O14753 267 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 IGKV2D-40P01614 121 aaPredicted RBP6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 EDN2P20800 178 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 CBLN1P23435 193 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 DEFB136Q30KP8 78 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PRR27Q6MZM9 219 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 VGLL1Q99990 258 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
CNTNAP3B-213ENST00000617848 TEX15Q9BXT5 2789 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 A0A1B0GUS0 222 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 C1orf196B1AJZ1 125 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PRB4P10163 310 aaPredicted RBP6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 PROK1P58294 105 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 COX8CQ7Z4L0 72 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
CNTNAP3B-213ENST00000617848 ZNF738Q8NE65 137 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms