RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 C20orf173Q96LM9 149 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 EPDR1Q9UM22 224 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 IZUMO1RA6ND01 250 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 TCRAP04437 139 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
CBWD1-225ENST00000616944 DERL1Q9BUN8 251 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
CBWD1-225ENST00000616944 PEX7O00628 323 aa11.36□□□□□ -0.59
CBWD1-225ENST00000616944 RBPMS2Q6ZRY4 209 aaKnown RBP11.36□□□□□ -0.59
CBWD1-225ENST00000616944 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
CBWD1-225ENST00000616944 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
CBWD1-225ENST00000616944 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
CBWD1-225ENST00000616944 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
CBWD1-225ENST00000616944 ZNF256Q9Y2P7 627 aaPredicted RBP11.36□□□□□ -0.59
CBWD1-225ENST00000616944 AGRNO00468 2067 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 DIRC3C9JPN6 131 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 ATP6V1G1O75348 118 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 PSG3Q16557 428 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 OR2K2Q8NGT1 345 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 CMTM2Q8TAZ6 248 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 PARLQ9H300 379 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
CBWD1-225ENST00000616944 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
CBWD1-225ENST00000616944 TFPI2P48307 235 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 INSL3P51460 131 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 PAFAH1B2P68402 229 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 C10orf91Q5T1B1 145 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 LCN12Q6JVE5 192 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 LINC00052Q96N35 136 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
CBWD1-225ENST00000616944 CMYA5Q8N3K9 4069 aa11.34□□□□□ -0.59
CBWD1-225ENST00000616944 WIPF1O43516 503 aa11.34□□□□□ -0.59
CBWD1-225ENST00000616944 WFDC3Q8IUB2 231 aa11.34□□□□□ -0.59
CBWD1-225ENST00000616944 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
CBWD1-225ENST00000616944 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
CBWD1-225ENST00000616944 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
CBWD1-225ENST00000616944 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 KRBOX1C9JBD0 128 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 PRAC2D3DTV9 90 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
CBWD1-225ENST00000616944 CD33P20138 364 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 ID1P41134 155 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 RPL35P42766 123 aaKnown RBP11.33□□□□□ -0.6
CBWD1-225ENST00000616944 CSN1S1P47710 185 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 CEBPGP53567 150 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 RPH3ALQ9UNE2 315 aa11.33□□□□□ -0.6
CBWD1-225ENST00000616944 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
CBWD1-225ENST00000616944 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CBWD1-225ENST00000616944 AKR1C3P42330 323 aa11.32□□□□□ -0.6
CBWD1-225ENST00000616944 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
CBWD1-225ENST00000616944 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
CBWD1-225ENST00000616944 CARHSP1Q9Y2V2 147 aaKnown RBP11.32□□□□□ -0.6
CBWD1-225ENST00000616944 IGKV2-40A0A087WW87 121 aaPredicted RBP11.31□□□□□ -0.6
CBWD1-225ENST00000616944 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 IGKV2D-40P01614 121 aaPredicted RBP11.31□□□□□ -0.6
CBWD1-225ENST00000616944 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 TRAV34A0A0B4J273 112 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 ZNF727A8MUV8 499 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 F8W036 122 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
CBWD1-225ENST00000616944 BEAN1Q3B7T3 259 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 FAM74A3Q4VXF1 159 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
CBWD1-225ENST00000616944 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 C9JCJ5 164 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 TAS2R60P59551 318 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 DEFB1P60022 68 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 VGLL1Q99990 258 aa11.3□□□□□ -0.6
CBWD1-225ENST00000616944 K7EQM0 130 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 S100A9P06702 114 aaKnown RBP11.29□□□□□ -0.6
CBWD1-225ENST00000616944 IGLL1P15814 213 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 Q86TA4 180 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 MAP6D1Q9H9H5 199 aa11.29□□□□□ -0.6
CBWD1-225ENST00000616944 F6UB75 175 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 LTAP01374 205 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 UBE2G1P62253 170 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
CBWD1-225ENST00000616944 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms