RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LY6G5BQ8NDX9 201 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 PLA2G2EQ9NZK7 142 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 TCF15Q12870 199 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 CHCHD5Q9BSY4 110 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 ZSWIM8A7E2V4 1837 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 A0A087WWL8 130 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 OVOL2Q9BRP0 275 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 OOSP1A8MZH6 123 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 VMO1Q7Z5L0 202 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 SRSF8Q9BRL6 282 aaKnown RBP15.18■□□□□ 0.02
SPAST-203ENST00000615843 COLQQ9Y215 455 aaPredicted RBP15.18■□□□□ 0.02
SPAST-203ENST00000615843 TP53TG1Q9Y2A0 90 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 RSPO1Q2MKA7 263 aaPredicted RBP15.18■□□□□ 0.02
SPAST-203ENST00000615843 TRBV7-1A0A0A6YYK4 115 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 TRGV4A0A0C4DH28 118 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 TAL2Q16559 108 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 MRPL35Q9NZE8 188 aaKnown RBP15.18■□□□□ 0.02
SPAST-203ENST00000615843 ROS1P08922 2347 aa15.18■□□□□ 0.02
SPAST-203ENST00000615843 NUPR1O60356 82 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 VGLL1Q99990 258 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 LEPROTO15243 131 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 AMTNQ6UX39 209 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 PRDM6Q9NQX0 595 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 HEATR5AQ86XA9 2040 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 ZNF688P0C7X2 276 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 IFITM1P13164 125 aa15.17■□□□□ 0.02
SPAST-203ENST00000615843 KLF5Q13887 457 aaPredicted RBP15.16■□□□□ 0.02
SPAST-203ENST00000615843 TDRG1Q3Y452 100 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 MINOS1Q5TGZ0 78 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 MINOS1-NBL1R4GNA1 71 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 FCN3O75636 299 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 PF4P02776 101 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 PHLDA1Q8WV24 401 aaPredicted RBP15.16■□□□□ 0.02
SPAST-203ENST00000615843 NPYP01303 97 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 ABCA1O95477 2261 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 TMEM105Q8N8V8 129 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 RNASE8Q8TDE3 154 aaKnown RBP15.16■□□□□ 0.02
SPAST-203ENST00000615843 WIPF2Q8TF74 440 aaPredicted RBP15.16■□□□□ 0.02
SPAST-203ENST00000615843 PI4KAP42356 2102 aa15.16■□□□□ 0.02
SPAST-203ENST00000615843 IGLV3-1P01715 115 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 OR11H6Q8NGC7 330 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 ZNF625Q96I27 306 aaPredicted RBP15.15■□□□□ 0.02
SPAST-203ENST00000615843 LYPD2Q6UXB3 125 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 PRADC1Q9BSG0 188 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 PRIMA1Q86XR5 153 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 MDS2Q8NDY4 140 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 VWA8A3KMH1 1905 aa15.15■□□□□ 0.02
SPAST-203ENST00000615843 WNK2Q9Y3S1 2297 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 TMEM219Q86XT9 240 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PRR20EP86478 221 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PRR20CP86479 221 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PRR20DP86480 221 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PRR20BP86481 221 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PRR20AP86496 221 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 WDR86Q86TI4 376 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 CITED1Q99966 193 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 ZNF747Q9BV97 191 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 JPT2Q9H910 190 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 PMVKQ15126 192 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 TMEM141Q96I45 108 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 FGF6P10767 208 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 FXYD5Q96DB9 178 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 DKK2Q9UBU2 259 aa15.14■□□□□ 0.01
SPAST-203ENST00000615843 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
SPAST-203ENST00000615843 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
SPAST-203ENST00000615843 LAMTOR3Q9UHA4 124 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 DIDO1Q9BTC0 2240 aaKnown RBP15.13■□□□□ 0.01
SPAST-203ENST00000615843 ZC2HC1AQ96GY0 325 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 C1orf159Q96HA4 380 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 PRSS22Q9GZN4 317 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 DOCK9Q9BZ29 2069 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 NDUFS7O75251 213 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 PRR25Q96S07 402 aa15.13■□□□□ 0.01
SPAST-203ENST00000615843 C12orf74Q32Q52 190 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 IL17RELQ6ZVW7 336 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 PRO1854Q9UHT4 67 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 TMEM14CQ9P0S9 112 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 TSC2P49815 1807 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 F8VRH5 84 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 HLA-DRB4P13762 266 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 C1QTNF4Q9BXJ3 329 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 HLA-DRB4X5D2U9 266 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 INAFM2P0DMQ5 153 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 ZNF415Q09FC8 603 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
SPAST-203ENST00000615843 TCF20Q9UGU0 1960 aaKnown RBP15.12■□□□□ 0.01
SPAST-203ENST00000615843 TRAV26-2A0A0B4J265 109 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 HTN3P15516 51 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 SCN5AQ14524 2016 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 A0A1W2PRX2 142 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 WT1-ASQ06250 92 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 ZNF833PQ6ZTB9 187 aa15.11■□□□□ 0.01
SPAST-203ENST00000615843 RNF166Q96A37 237 aaPredicted RBP15.11■□□□□ 0.01
SPAST-203ENST00000615843 TRPT1Q86TN4 253 aaKnown RBP15.11■□□□□ 0.01
SPAST-203ENST00000615843 M0R1W7 72 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 POLEQ07864 2286 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 TRAV13-1A0A0B4J241 112 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 HEATR1Q9H583 2144 aaKnown RBP15.1■□□□□ 0.01
SPAST-203ENST00000615843 C17orf58Q2M2W7 97 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms