RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LGI3Q8N145 548 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 EIF4E3Q8N5X7 224 aaKnown RBP4.37□□□□□ -1.71
MUC1-227ENST00000615517 PACRGLQ8N7B6 248 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 RNASE11Q8TAA1 199 aaKnown RBP4.37□□□□□ -1.71
MUC1-227ENST00000615517 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 SCN3BQ9NY72 215 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 U3KQ87 197 aa4.37□□□□□ -1.71
MUC1-227ENST00000615517 TRAV8-6A0A0B4J262 113 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 A0A0D9SG52 128 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 C7orf71A4D174 169 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 C9JCJ5 164 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 CDS2O95674 445 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 CFDP00746 253 aaPredicted RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 RPL7P18124 248 aaKnown RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 LEPP41159 167 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 BTN1A1Q13410 526 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 IBA57Q5T440 356 aaKnown RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 GGNBP1Q5YKI7 109 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 STEAP1BQ6NZ63 245 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 SELENOHQ8IZQ5 122 aaKnown RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 OR10G4Q8NGN3 311 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 TMEM147Q9BVK8 224 aa4.36□□□□□ -1.71
MUC1-227ENST00000615517 ZNF331Q9NQX6 463 aaPredicted RBP4.36□□□□□ -1.71
MUC1-227ENST00000615517 TRAV8-3A0A0A6YYJ7 113 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 PMS2P5A8MQ11 134 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 SLC17A3O00476 420 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 SDC2P34741 201 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 RCVRNP35243 200 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 MXD1Q05195 221 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 PRSS48Q7RTY5 328 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 DAZ4Q86SG3 579 aaKnown RBP4.35□□□□□ -1.71
MUC1-227ENST00000615517 LHFPL1Q86WI0 220 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 NHLRC2Q8NBF2 726 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 HSD17B11Q8NBQ5 300 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 CLRN3Q8NCR9 226 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 BPIFCQ8NFQ6 507 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 OR10P1Q8NGE3 313 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 LRRC20Q8TCA0 184 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 DTD1Q8TEA8 209 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 GLYATL2Q8WU03 294 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 TMEM222Q9H0R3 208 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 RBKSQ9H477 322 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 DAZ3Q9NR90 486 aaKnown RBP4.35□□□□□ -1.71
MUC1-227ENST00000615517 TPRKBQ9Y3C4 175 aa4.35□□□□□ -1.71
MUC1-227ENST00000615517 KLLNB2CW77 178 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 PRSS46E5RG02 174 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 H3BTX0 84 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 SLC25A5P05141 298 aaKnown RBP4.34□□□□□ -1.71
MUC1-227ENST00000615517 PRR9Q5T870 116 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 GPR107Q5VW38 600 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 SH2D6Q7Z4S9 175 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 OR1S1Q8NH92 325 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 GPX8Q8TED1 209 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 C8orf4Q9NR00 106 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 HSPB7Q9UBY9 170 aa4.34□□□□□ -1.71
MUC1-227ENST00000615517 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
MUC1-227ENST00000615517 CRYM-AS1A6NIL9 109 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 MPDU1O75352 247 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 CXCL2P19875 107 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 RNASE4P34096 147 aaKnown RBP4.33□□□□□ -1.72
MUC1-227ENST00000615517 PRSS3P35030 304 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 ERCC8Q13216 396 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 FFAR4Q5NUL3 377 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 WDR73Q6P4I2 378 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 PATE2Q6UY27 113 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 ACOT7LQ6ZUV0 252 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 RASL10AQ92737 203 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 S100A16Q96FQ6 103 aaKnown RBP4.33□□□□□ -1.72
MUC1-227ENST00000615517 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 COPZ2Q9P299 210 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 HIGD1AQ9Y241 93 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 COX11Q9Y6N1 276 aa4.33□□□□□ -1.72
MUC1-227ENST00000615517 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 IGHV1OR15-1A0A075B7D0 117 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 TRAV8-1A0A0A6YYK1 113 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 TRAV4A0A0B4J268 109 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 IGHV3-16A0A0C4DH30 117 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 PHOX2AO14813 284 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 HYPMO75409 117 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 SULT1A3P0DMM9 295 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 SULT1A4P0DMN0 295 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 S100A7P31151 101 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 ATP5IP56385 69 aaPredicted RBP4.32□□□□□ -1.72
MUC1-227ENST00000615517 PLP1P60201 277 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 RAP2BP61225 183 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
MUC1-227ENST00000615517 OPCMLQ14982 345 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 TMEM268Q5VZI3 342 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 CCDC71LQ8N9Z2 235 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 OR13C8Q8NGS7 320 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 SLC50A1Q9BRV3 221 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
MUC1-227ENST00000615517 GGTLC3B5MD39 225 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms