RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 DLX6P56179 175 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 MBD6Q96DN6 1003 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 PCSK5Q92824 1860 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 HAX1O00165 279 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 THBDP07204 575 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 ERCC8Q13216 396 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 M0R381 172 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 MEGF9Q9H1U4 602 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 MUC6Q6W4X9 2439 aa9.95□□□□□ -0.82
MSH6-213ENST00000614496 C5orf64Q2M2E5 130 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 Q8N976 141 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 DEFB104AQ8WTQ1 72 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 C3orf36Q3SXR2 165 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 VWC2LB2RUY7 222 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 SMIM17P0DL12 118 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 IGFL3Q6UXB1 125 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 PIP4P1Q86T03 277 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 METTL26Q96S19 204 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 SIGLEC8Q9NYZ4 499 aa9.94□□□□□ -0.82
MSH6-213ENST00000614496 SMIM13P0DJ93 91 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 ZNF491Q8N8L2 437 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 OR2K2Q8NGT1 345 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 CD5LO43866 347 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
MSH6-213ENST00000614496 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
MSH6-213ENST00000614496 NDUFA3O95167 84 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 RHOGP84095 191 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 ZNF502Q8TBZ5 544 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 PTPRQQ9UMZ3 2332 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 MRPL51Q4U2R6 128 aaKnown RBP9.93□□□□□ -0.82
MSH6-213ENST00000614496 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 ZNF747Q9BV97 191 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
MSH6-213ENST00000614496 A0A1B0GXF2 115 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 FAM104BQ5XKR9 115 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 DSPP15924 2871 aaKnown RBP9.92□□□□□ -0.82
MSH6-213ENST00000614496 PSMB11A5LHX3 300 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 J3QR89 54 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
MSH6-213ENST00000614496 A0A0G2JLM5 398 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 H3BRN7 92 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 SEC11AP67812 179 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
MSH6-213ENST00000614496 IGF2RP11717 2491 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 NPYP01303 97 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 VGLL1Q99990 258 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 FREM2Q5SZK8 3169 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 C19orf71A6NCJ1 209 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 COX8AP10176 69 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
MSH6-213ENST00000614496 NDPQ00604 133 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 LY6EQ16553 131 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 FAM106AQ4KMX7 169 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 OCIAD2Q56VL3 154 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 LYPD1Q8N2G4 141 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
MSH6-213ENST00000614496 I3L2K1 104 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
MSH6-213ENST00000614496 SHISA9B4DS77 424 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 TEX22C9J3V5 150 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 K7EIM0 57 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 HSD52Q0P140 79 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 VMO1Q7Z5L0 202 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 PHLDA3Q9Y5J5 127 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 Q71RC1 249 aaPredicted RBP9.9□□□□□ -0.82
MSH6-213ENST00000614496 NEU4Q8WWR8 484 aaPredicted RBP9.9□□□□□ -0.82
MSH6-213ENST00000614496 LINC00574Q9H8X3 128 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 KAAG1Q9UBP8 84 aa9.9□□□□□ -0.82
MSH6-213ENST00000614496 DOPEY2Q9Y3R5 2298 aa9.9□□□□□ -0.83
MSH6-213ENST00000614496 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 LOXL1Q08397 574 aaPredicted RBP9.89□□□□□ -0.83
MSH6-213ENST00000614496 TMEM158Q8WZ71 300 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 PRR25Q96S07 402 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 SMAD7O15105 426 aaKnown RBP9.89□□□□□ -0.83
MSH6-213ENST00000614496 PRSS22Q9GZN4 317 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 JKAMPQ9P055 326 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 TAX1BP3O14907 124 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 CEACAM4O75871 244 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 IGHV3-11P01762 117 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 CRYGCP07315 174 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 PF4V1P10720 104 aa9.89□□□□□ -0.83
MSH6-213ENST00000614496 H3BVH4 76 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms