RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 IGHG4P01861 327 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 PDE6HQ13956 83 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 MAJINQ3KP22 176 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 LURAP1LQ8IV03 231 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 C5orf56Q8N8D9 126 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 CCL19Q99731 98 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 SNHG12Q9BXW3 62 aa15.33■□□□□ 0.05
SMARCD2-212ENST00000613943 EBLN2Q6P2I7 272 aa15.33■□□□□ 0.04
SMARCD2-212ENST00000613943 RNF182Q8N6D2 247 aa15.33■□□□□ 0.04
SMARCD2-212ENST00000613943 BORCS7Q96B45 105 aa15.33■□□□□ 0.04
SMARCD2-212ENST00000613943 TRBV6-1A0A0K0K1D8 114 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 CSN1S1P47710 185 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 OR4B1Q8NGF8 309 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 NRGNQ92686 78 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 DOPEY1Q5JWR5 2465 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 FAM181BA6NEQ2 426 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 ZFAND3Q9H8U3 227 aa15.32■□□□□ 0.04
SMARCD2-212ENST00000613943 CSN3P07498 182 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 IGHV4-38-2P0DP08 117 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 RELQ04864 619 aaPredicted RBP15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 LOC102724200A0A096LPH7 203 aaPredicted RBP15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 A0A1B0GUT8 65 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 HAX1O00165 279 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 CT45A10P0DMU9 189 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 LY6EQ16553 131 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 SPATA12Q7Z6I5 190 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 S100A7AQ86SG5 101 aa15.31■□□□□ 0.04
SMARCD2-212ENST00000613943 PRAC2D3DTV9 90 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 SH2D1AO60880 128 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 ZNF80P51504 273 aaPredicted RBP15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 PSG9Q00887 426 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 PAX8Q06710 450 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 ERCC8Q13216 396 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 LINC00173Q6ZV60 143 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 PIFOQ8TCI5 191 aa15.3■□□□□ 0.04
SMARCD2-212ENST00000613943 IGHV4-30-2A0A087WSY4 118 aa15.29■□□□□ 0.04
SMARCD2-212ENST00000613943 CLPSL1A2RUU4 121 aa15.29■□□□□ 0.04
SMARCD2-212ENST00000613943 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
SMARCD2-212ENST00000613943 TXN2Q99757 166 aa15.29■□□□□ 0.04
SMARCD2-212ENST00000613943 TIMM8BQ9Y5J9 83 aaPredicted RBP15.29■□□□□ 0.04
SMARCD2-212ENST00000613943 BUB3O43684 328 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 SPATA45Q537H7 98 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 PRR25Q96S07 402 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 C20orf144Q9BQM9 153 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 PIMREGQ9BSJ6 248 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 TMEM213A2RRL7 107 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 SCGB2A1O75556 95 aa15.28■□□□□ 0.04
SMARCD2-212ENST00000613943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.27■□□□□ 0.041e-7■■■■□ 24.6
SMARCD2-212ENST00000613943 POLQO75417 2590 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 IGHV1-69DA0A0B4J2H0 117 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 IGHV1-24A0A0C4DH33 117 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 IGHV1-69P01742 117 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 ATP5J2P56134 94 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 LYZL1Q6UWQ5 148 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 LINC00469Q8N7U9 141 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 C2orf88Q9BSF0 95 aa15.27■□□□□ 0.04
SMARCD2-212ENST00000613943 CENPEQ02224 2701 aa15.27■□□□□ 0.03
SMARCD2-212ENST00000613943 ZMAT5Q9UDW3 170 aaKnown RBP15.27■□□□□ 0.03
SMARCD2-212ENST00000613943 C2orf70A6NJV1 201 aa15.26■□□□□ 0.03
SMARCD2-212ENST00000613943 C10orf105Q8TEF2 133 aa15.26■□□□□ 0.03
SMARCD2-212ENST00000613943 MIEN1Q9BRT3 115 aa15.26■□□□□ 0.03
SMARCD2-212ENST00000613943 TMEM189A5PLL7 270 aa15.26■□□□□ 0.03
SMARCD2-212ENST00000613943 CTRLP40313 264 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 FAM162BQ5T6X4 162 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 MCRIP2Q9BUT9 160 aaKnown RBP15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 MOB4Q9Y3A3 225 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 CSPG4Q6UVK1 2322 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 TRAV41A0A0B4J266 112 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 SERTM2A0A1B0GWG4 89 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 GOSR1O95249 250 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 TRBV12-3P01733 135 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 RIGQ13278 110 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 EEF1AKMT3Q96AZ1 226 aa15.25■□□□□ 0.03
SMARCD2-212ENST00000613943 LINC00614P0C842 121 aa15.24■□□□□ 0.03
SMARCD2-212ENST00000613943 NDFIP1Q9BT67 221 aa15.24■□□□□ 0.03
SMARCD2-212ENST00000613943 PRB1P04280 392 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 RAB4AP20338 218 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 Q6ZS46 218 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 LCNL1Q6ZST4 164 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 SELENOKQ9Y6D0 94 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 FAM208BQ5VWN6 2430 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 FBN2P35556 2912 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 M0R143 59 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 BTF3P20290 206 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 BATFQ16520 125 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 CLEC2AQ6UVW9 174 aa15.23■□□□□ 0.03
SMARCD2-212ENST00000613943 H0Y8G0 127 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 ATP5G2Q06055 141 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 ZNF575Q86XF7 245 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 AMN1Q8IY45 258 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 ZANQ9Y493 2812 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 USP9YO00507 2555 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 H3BUX3 64 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 TRGV3P03979 118 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 IL17RELQ6ZVW7 336 aa15.22■□□□□ 0.03
SMARCD2-212ENST00000613943 TP73-AS1Q9UF72 201 aa15.21■□□□□ 0.03
SMARCD2-212ENST00000613943 ZNF462Q96JM2 2506 aa15.21■□□□□ 0.03
SMARCD2-212ENST00000613943 AVPP01185 164 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms