RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 LYPD1Q8N2G4 141 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 RNF182Q8N6D2 247 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 ZNF738Q8NE65 137 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 NRN1Q9NPD7 142 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 MLXQ9UH92 298 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 EPDR1Q9UM22 224 aa6.35□□□□□ -1.39
PSMB3-208ENST00000613870 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 TSPAN4O14817 238 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 CD33P20138 364 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 HLA-DMBP28068 263 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 UBE2G1P62253 170 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 SAMD5Q5TGI4 173 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 SAMD13Q5VXD3 122 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 GOLT1AQ6ZVE7 132 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 SMIM7Q9BQ49 75 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 ZNF331Q9NQX6 463 aaPredicted RBP6.34□□□□□ -1.39
PSMB3-208ENST00000613870 PRELID1Q9Y255 219 aa6.34□□□□□ -1.39
PSMB3-208ENST00000613870 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 TMEM250H0YL14 139 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 M0R036 132 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 M0R3E3 92 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 ZNF253O75346 499 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 APOC3P02656 99 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
PSMB3-208ENST00000613870 DEFB114Q30KQ6 69 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 KPRPQ5T749 579 aaPredicted RBP6.33□□□□□ -1.4
PSMB3-208ENST00000613870 LCN12Q6JVE5 192 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 ADAMTSL5Q6ZMM2 481 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 HIST1H2BAQ96A08 127 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 ATG101Q9BSB4 218 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 PARLQ9H300 379 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 CLEC5AQ9NY25 188 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 DNAH9Q9NYC9 4486 aa6.33□□□□□ -1.4
PSMB3-208ENST00000613870 IGKV2-40A0A087WW87 121 aaPredicted RBP6.32□□□□□ -1.4
PSMB3-208ENST00000613870 OR4C46A6NHA9 309 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
PSMB3-208ENST00000613870 ISLRO14498 428 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 IGKV2D-40P01614 121 aaPredicted RBP6.32□□□□□ -1.4
PSMB3-208ENST00000613870 TCRAP04437 139 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 ZNF688P0C7X2 276 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 RPL35P42766 123 aaKnown RBP6.32□□□□□ -1.4
PSMB3-208ENST00000613870 GNG4P50150 75 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 PSG3Q16557 428 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 CD300EQ496F6 205 aaPredicted RBP6.32□□□□□ -1.4
PSMB3-208ENST00000613870 FAM74A3Q4VXF1 159 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 PSMG4Q5JS54 123 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 PRNTQ86SH4 94 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 TMEM61Q8N0U2 210 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 WFDC9Q8NEX5 89 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 C11orf52Q96A22 123 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 SGK494Q96LW2 274 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 DERL1Q9BUN8 251 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 SEC11CQ9BY50 192 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 PPP1R14DQ9NXH3 145 aa6.32□□□□□ -1.4
PSMB3-208ENST00000613870 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 TRAV25A0A0B4J276 109 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
PSMB3-208ENST00000613870 S100A9P06702 114 aaKnown RBP6.31□□□□□ -1.4
PSMB3-208ENST00000613870 MGST1P10620 155 aaKnown RBP6.31□□□□□ -1.4
PSMB3-208ENST00000613870 ADIRFQ15847 76 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 CENPWQ5EE01 88 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 C9orf66Q5T8R8 295 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
PSMB3-208ENST00000613870 SERTM2A0A1B0GWG4 89 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 PRAC2D3DTV9 90 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 K7EQG2 157 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 NDUFS6O75380 124 aaKnown RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 HIST1H1AQ02539 215 aaPredicted RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 ERCC8Q13216 396 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 TMEM78Q5T7P6 136 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 EBLN2Q6P2I7 272 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 SVBPQ8N300 66 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 MRPL53Q96EL3 112 aaKnown RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 FMC1Q96HJ9 113 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 NDFIP1Q9BT67 221 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 MCRIP2Q9BUT9 160 aaKnown RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 AURKAIP1Q9NWT8 199 aaPredicted RBP6.3□□□□□ -1.4
PSMB3-208ENST00000613870 SIGLEC8Q9NYZ4 499 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 NAT8Q9UHE5 227 aa6.3□□□□□ -1.4
PSMB3-208ENST00000613870 TRAV8-1A0A0A6YYK1 113 aa6.29□□□□□ -1.4
PSMB3-208ENST00000613870 IZUMO1RA6ND01 250 aa6.29□□□□□ -1.4
PSMB3-208ENST00000613870 SOCS3O14543 225 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms