RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 BCE1O60756 84 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 SYNJ2BPP57105 145 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 TMEM155Q4W5P6 130 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 PCSK4Q6UW60 755 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 ZFP2Q6ZN57 461 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 C9orf139Q6ZV77 190 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
CCL16-206ENST00000613642 SFTPA2Q8IWL1 248 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
CCL16-206ENST00000613642 OR8A1Q8NGG7 326 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 C4orf45Q96LM5 186 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 TMEM243Q9BU79 118 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 C11orf68Q9H3H3 251 aaKnown RBP4.29□□□□□ -1.72
CCL16-206ENST00000613642 DEPPQ9NTK1 212 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 V9GYV3 84 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 PDE4DIPQ5VU43 2346 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 PAPPA2Q9BXP8 1791 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 LTBP1Q14766 1721 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 PCSK5Q92824 1860 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 H3BVH4 76 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 MGST3O14880 152 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 GNB1P62873 340 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 C11orf52Q96A22 123 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 CXCL16Q9H2A7 254 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 MOB4Q9Y3A3 225 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 OBSL1O75147 1896 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 PLXNA3P51805 1871 aa4.28□□□□□ -1.72
CCL16-206ENST00000613642 POLR2AP24928 1970 aaKnown RBP4.27□□□□□ -1.73
CCL16-206ENST00000613642 SCN10AQ9Y5Y9 1956 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 ANKRD36A6QL64 1941 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 GREB1LQ9C091 1923 aaPredicted RBP4.27□□□□□ -1.73
CCL16-206ENST00000613642 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 LOC107984156A0A0G2JMH3 177 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 TRBV10-2A0A0K0K1G8 114 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 C19orf71A6NCJ1 209 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 PRR32B1ATL7 298 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 TIMM17BO60830 172 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 ZNF823P16415 610 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 MYCNOSP40205 109 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 HBBP68871 147 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 ARL17AQ8IVW1 177 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
CCL16-206ENST00000613642 LYZL4Q96KX0 146 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 C17orf77Q96MU5 243 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 ZNF492Q9P255 531 aa4.27□□□□□ -1.73
CCL16-206ENST00000613642 KIAA1671Q9BY89 1806 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 IGLV3-22A0A075B6J6 115 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 TRAV41A0A0B4J266 112 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 A0A1B0GWA3 101 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 LINC00473A8K010 186 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 F6UB75 175 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 H3BP45 60 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 ATXN8Q156A1 80 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 TMEM30BQ3MIR4 351 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 FAM222AQ5U5X8 452 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 MIC13Q5XKP0 118 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 VN1R4Q7Z5H5 301 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 RPRMLQ8N4K4 120 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 RITA1Q96K30 269 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 ANKRD12Q6UB98 2062 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 NLRC5Q86WI3 1866 aa4.26□□□□□ -1.73
CCL16-206ENST00000613642 EXPH5Q8NEV8 1989 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 IFI6P09912 130 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 SLC25A16P16260 332 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 NPPCP23582 126 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 RPL34P49207 117 aaKnown RBP4.25□□□□□ -1.73
CCL16-206ENST00000613642 HCFC1P51610 2035 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 NCBP2P52298 156 aaKnown RBP eCLIP4.25□□□□□ -1.73
CCL16-206ENST00000613642 CCL23P55773 120 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 CEMP1Q6PRD7 247 aaPredicted RBP4.25□□□□□ -1.73
CCL16-206ENST00000613642 Q6ZVQ6 151 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 LCA10Q71F78 164 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 CLECL1Q8IZS7 167 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 TMEM75Q8N9X5 138 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 ZNF503Q96F45 646 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 VSIG2Q96IQ7 327 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 ZNF414Q96IQ9 312 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 MED12LQ86YW9 2145 aa4.25□□□□□ -1.73
CCL16-206ENST00000613642 RAI1Q7Z5J4 1906 aaPredicted RBP4.25□□□□□ -1.73
CCL16-206ENST00000613642 RALGAPA2Q2PPJ7 1873 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 COL11A1P12107 1806 aaPredicted RBP4.24□□□□□ -1.73
CCL16-206ENST00000613642 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 C16orf97H3BN30 126 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
CCL16-206ENST00000613642 NXPH3O95157 252 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 GYPEP15421 78 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 UBE2D1P51668 147 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 ABCA11PQ4W5N1 156 aa4.24□□□□□ -1.73
CCL16-206ENST00000613642 UNQ9165/PRO28630Q6UXU0 137 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms