RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 AZU1P20160 251 aa16.17■□□□□ 0.18
CTDP1-208ENST00000613122 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
CTDP1-208ENST00000613122 ZMAT4Q9H898 229 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 DEFB113Q30KQ7 82 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 LY6G5BQ8NDX9 201 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 SMKR1H3BMG3 65 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 DMRTA1Q5VZB9 504 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 AMN1Q8IY45 258 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 MYMXA0A1B0GTQ4 84 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 PRB1P04280 392 aa16.16■□□□□ 0.18
CTDP1-208ENST00000613122 HSD52Q0P140 79 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 FAM120AOSQ5T036 256 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 DMRTC2Q8IXT2 367 aaPredicted RBP16.15■□□□□ 0.18
CTDP1-208ENST00000613122 CXCL1P09341 107 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 MTURNQ8N3F0 131 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 MRPL27Q9P0M9 148 aaKnown RBP16.15■□□□□ 0.18
CTDP1-208ENST00000613122 ZNF561-AS1K7EIQ3 104 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 IGHV2-5P01817 119 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 PFN1P07737 140 aaKnown RBP16.15■□□□□ 0.18
CTDP1-208ENST00000613122 C8orf86Q6ZUL3 223 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 TRBV25-1A0A075B6N4 114 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 GAGE12BA1L429 117 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 GAGE7O76087 117 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 GAGE12FP0CL80 117 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 GAGE12GP0CL81 117 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 GAGE12IP0CL82 117 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 ARTNQ5T4W7 220 aa16.15■□□□□ 0.18
CTDP1-208ENST00000613122 IGHV1OR15-1A0A075B7D0 117 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 IGHV3-16A0A0C4DH30 117 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 WISP1O95388 367 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 SHISA9B4DS77 424 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 INS-IGF2F8WCM5 200 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 TIMM21Q9BVV7 248 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 GFRA4Q9GZZ7 299 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 GRNP28799 593 aaKnown RBP16.14■□□□□ 0.17
CTDP1-208ENST00000613122 EREGO14944 169 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 PAX9P55771 341 aa16.14■□□□□ 0.17
CTDP1-208ENST00000613122 LEPROTO15243 131 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 PRIMA1Q86XR5 153 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 LAMTOR3Q9UHA4 124 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 K7EM74 188 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 FNDC4Q9H6D8 234 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-208ENST00000613122 KAAG1Q9UBP8 84 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 WT1P19544 449 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-208ENST00000613122 DEFB112Q30KQ8 113 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 VPREB3Q9UKI3 123 aa16.13■□□□□ 0.17
CTDP1-208ENST00000613122 TSSC4Q9Y5U2 329 aaPredicted RBP16.12■□□□□ 0.17
CTDP1-208ENST00000613122 CDKN1BP46527 198 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 IGF2-ASQ6U949 168 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 LINC00479Q96M42 142 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 LRRK1Q38SD2 2015 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 A8MWV9 139 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 DOCK8Q8NF50 2099 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 TRBV19A0A075B6N1 114 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 LYL1P12980 280 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 ZNF479Q96JC4 524 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 C8orf49Q96NF6 230 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 SPXQ9BT56 116 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
CTDP1-208ENST00000613122 SRSF4Q08170 494 aaKnown RBP16.12■□□□□ 0.17
CTDP1-208ENST00000613122 HOXB4P17483 251 aaPredicted RBP16.11■□□□□ 0.17
CTDP1-208ENST00000613122 CFPP27918 469 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 NDUFS7O75251 213 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 MPDZO75970 2070 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 GSN-AS1Q9NRJ2 163 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 TPSG1Q9NRR2 321 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 C15orf65H3BRN8 121 aa16.11■□□□□ 0.17
CTDP1-208ENST00000613122 WDR81Q562E7 1941 aa16.1■□□□□ 0.17
CTDP1-208ENST00000613122 TNFRSF6BO95407 300 aa16.1■□□□□ 0.17
CTDP1-208ENST00000613122 DOPEY2Q9Y3R5 2298 aa16.1■□□□□ 0.17
CTDP1-208ENST00000613122 PHF3Q92576 2039 aaKnown RBP16.1■□□□□ 0.17
CTDP1-208ENST00000613122 TRAV12-2A0A075B6T6 113 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 H3BUA1 57 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 HIST1H2BLQ99880 126 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 IGHV7-4-1A0A0J9YVY3 117 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 IGHV4-59P01825 116 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 MMP23AO75900 390 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 IGHV2-70P01814 119 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 KLF2Q9Y5W3 355 aaPredicted RBP16.09■□□□□ 0.17
CTDP1-208ENST00000613122 USF3Q68DE3 2245 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 TRAV8-4A0A0B4J246 113 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 RMI2Q96E14 147 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 ZNF492Q9P255 531 aa16.09■□□□□ 0.17
CTDP1-208ENST00000613122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.09■□□□□ 0.17
CTDP1-208ENST00000613122 ROS1P08922 2347 aa16.08■□□□□ 0.17
CTDP1-208ENST00000613122 IGFL2Q6UWQ7 119 aa16.08■□□□□ 0.16
CTDP1-208ENST00000613122 H3BRN7 92 aa16.08■□□□□ 0.16
CTDP1-208ENST00000613122 DIAPH2-AS1Q14236 149 aa16.08■□□□□ 0.16
CTDP1-208ENST00000613122 C22orf46C9J442 243 aa16.08■□□□□ 0.16
CTDP1-208ENST00000613122 CGB3P0DN86 165 aa16.08■□□□□ 0.16
CTDP1-208ENST00000613122 I3L3M4 83 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 HAPLN4Q86UW8 402 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 MRAPQ8TCY5 172 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 ZNF524Q96C55 264 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 GUSBP1Q15486 140 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 A0A1B0GV72 72 aa16.07■□□□□ 0.16
CTDP1-208ENST00000613122 WT1-ASQ06250 92 aa16.06■□□□□ 0.16
CTDP1-208ENST00000613122 YLPM1P49750 1951 aaKnown RBP16.06■□□□□ 0.16
CTDP1-208ENST00000613122 TSC2P49815 1807 aa16.06■□□□□ 0.16
CTDP1-208ENST00000613122 SAMD5Q5TGI4 173 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms