RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CR1LQ2VPA4 569 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 WFDC5Q8TCV5 224 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 FER1L5A0AVI2 2057 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 HLA-DRB4P13762 266 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 HLA-DRB4X5D2U9 266 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 COX14Q96I36 57 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 FXYD2P54710 66 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 METTL26Q96S19 204 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 CCL5P13501 91 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 ZFP36L1Q07352 338 aaKnown RBP4.05□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 CRLF1O75462 422 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SUMO2P61956 95 aaKnown RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF474Q6S9Z5 364 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 FAM19A5Q7Z5A7 132 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 NTN5Q8WTR8 489 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 DEFB118Q96PH6 123 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 RS1O15537 224 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SSC4DQ8WTU2 575 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LRP4O75096 1905 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ATG2AQ2TAZ0 1938 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LOC101059948A0A1B0GTJ6 334 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF726P1Q15940 193 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF501Q96CX3 271 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 NDUFB3O43676 98 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SCARF2Q96GP6 870 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 IGHV3-43A0A0B4J1X8 118 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 IGHV3-43DP0DP04 118 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LY6DQ14210 128 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 NEU4Q8WWR8 484 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 CD7P09564 240 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 RPL27AP46776 148 aaKnown RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 FOXG1P55316 489 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 PRR31Q5SQ13 230 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 Q8N1Y9 231 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 RNASE2P10153 161 aaKnown RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SLC25A16P16260 332 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 CALYQ9NYX4 217 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 H3BT86 120 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ZNHIT1O43257 154 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 IGHV3-9P01782 118 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 HS3ST6Q96QI5 342 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LSM4Q9Y4Z0 139 aaKnown RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 IGHV3-20A0A0C4DH32 117 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ARHGAP32A7KAX9 2087 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 ITGBL1O95965 494 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1-5P01602 117 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 CSRP1P21291 193 aaKnown RBP4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LYZL1Q6UWQ5 148 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 LINC00526Q96FQ7 95 aa4.04□□□□□ -1.76
VPS13D-213ENST00000613099 EML5Q05BV3 1969 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1-9A0A0C4DH69 117 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 CYYR1Q96J86 154 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM240Q5SV17 173 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 A0A087WV48 116 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM86BQ8N661 226 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 TRGV9Q99603 122 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 DEFB108BQ8NET1 73 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF493Q6ZR52 646 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 PRORYQ9H606 182 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 F8VRH5 84 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 CXCL13O43927 109 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 SLC50A1Q9BRV3 221 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 BADQ92934 168 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 SERP1Q9Y6X1 66 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 MALP21145 153 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 C2orf70A6NJV1 201 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 CTGFP29279 349 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 IGHV3OR15-7A0A075B7D8 119 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 PRSS12P56730 875 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 PHLDA1Q8WV24 401 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-213ENST00000613099 FGF22Q9HCT0 170 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 TRAV13-2A0A0B4J235 113 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 IGLC6P0CF74 106 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 MAGEA5P43359 124 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 PAX9P55771 341 aa4.03□□□□□ -1.76
VPS13D-213ENST00000613099 C15orf61A6NNL5 157 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 LGALS9O00182 355 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 A0A0U1RQV1 116 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 C15orf62A8K5M9 175 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 C16orf92Q96LL3 132 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 XGP55808 180 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 GUSBP11Q6P575 273 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 RNF138Q8WVD3 245 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 JPT2Q9H910 190 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 IGFBP4P22692 258 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 LTBRP36941 435 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 PEAR1Q5VY43 1037 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-213ENST00000613099 IGKV1-8A0A0C4DH67 115 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 TINCRA0A1B0GVN0 87 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 NCR2O95944 276 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms