RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 K7EP13 123 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 SLC17A3O00476 420 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 PSCAO43653 123 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 VAMP1P23763 118 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 ZNF431Q8TF32 576 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 CTDSPLO15194 276 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 LINC00305Q7Z4B0 112 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 ZBTB8BQ8NAP8 495 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 ST6GAL2Q96JF0 529 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 UBR4Q5T4S7 5183 aa11.62□□□□□ -0.55
CSNK1E-215ENST00000612795 C7orf71A4D174 169 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 SLC38A11Q08AI6 406 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 SLAQ13239 276 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 TMEM128Q5BJH2 165 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 PATE2Q6UY27 113 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 C8orf49Q96NF6 230 aa11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 NAA50Q9GZZ1 169 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-215ENST00000612795 CTDSP2O14595 271 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 SPINK4O60575 86 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 SRIP30626 198 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 CRYBA4P53673 196 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 CTF1Q16619 201 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 TEPPQ6URK8 271 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 DIRAS2Q96HU8 199 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 RABL2AQ9UBK7 228 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 HHLA3Q9XRX5 114 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
CSNK1E-215ENST00000612795 COX7A2P2O60397 106 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 PRAF2O60831 178 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 CRYGDP07320 174 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 HOXB5P09067 269 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 TCL1AP56279 114 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 PXDC1Q5TGL8 231 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 PSENENQ9NZ42 101 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
CSNK1E-215ENST00000612795 GOSR2O14653 212 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 ANXA2RQ3ZCQ2 193 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 ZNF546Q86UE3 836 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 PCNPQ8WW12 178 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 VGLL1Q99990 258 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 CCDC59Q9P031 241 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 DNAH8Q96JB1 4490 aa11.58□□□□□ -0.56
CSNK1E-215ENST00000612795 HMCN2Q8NDA2 5059 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 E5RGE8 158 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 K7EPK0 472 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 CCNKO75909 580 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 BTN1A1Q13410 526 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 FAM30AQ9NZY2 134 aa11.57□□□□□ -0.56
CSNK1E-215ENST00000612795 TRGV4A0A0C4DH28 118 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 K7EQD1 137 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 SSSCA1O60232 199 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 FHL2Q14192 279 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 IBA57Q5T440 356 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 Q8N814 137 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 ARPC5LQ9BPX5 153 aa11.56□□□□□ -0.56
CSNK1E-215ENST00000612795 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 FNDC10F2Z333 226 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 H3BQ15 152 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 RGS13O14921 159 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 MPDU1O75352 247 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 SFT2D2O95562 160 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 METTL15P1P0C7V9 234 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 CD300CQ08708 224 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 OPCMLQ14982 345 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 MORN5Q5VZ52 161 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 C10orf113Q5VZT2 155 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 SAT2Q96F10 170 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 RSL24D1Q9UHA3 163 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
CSNK1E-215ENST00000612795 KLLNB2CW77 178 aa11.54□□□□□ -0.56
CSNK1E-215ENST00000612795 AGPAT2O15120 278 aa11.54□□□□□ -0.56
CSNK1E-215ENST00000612795 ERCC8Q13216 396 aa11.54□□□□□ -0.56
CSNK1E-215ENST00000612795 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
CSNK1E-215ENST00000612795 GUK1Q16774 197 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms