RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 RNF222A6NCQ9 220 aa13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 MRPL53Q96EL3 112 aaKnown RBP13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 TIMM9Q9Y5J7 89 aa13.02□□□□□ -0.33
SEMA3B-211ENST00000612509 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 G3V3Q6 166 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 OR10J6PQ8NGY7 276 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 CELA1Q9UNI1 258 aa13.01□□□□□ -0.33
SEMA3B-211ENST00000612509 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 M0R3E3 92 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 OR7C2O60412 319 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 HBE1P02100 147 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 OR10J4P0C629 311 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 ACOT6Q3I5F7 207 aaPredicted RBP13□□□□□ -0.33
SEMA3B-211ENST00000612509 KHDC3LQ587J8 217 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 HSD17B11Q8NBQ5 300 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 INO80EQ8NBZ0 244 aaPredicted RBP13□□□□□ -0.33
SEMA3B-211ENST00000612509 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 TNFSF18Q9UNG2 199 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 TENM2Q9NT68 2774 aa13□□□□□ -0.33
SEMA3B-211ENST00000612509 JTBO76095 146 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 M6PRP20645 277 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 CDKN1BP46527 198 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 UBE2L3P68036 154 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 ZNF503Q96F45 646 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 PHYHIPLQ96FC7 376 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 PRELID1Q9Y255 219 aa12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 KLK5Q9Y337 293 aaPredicted RBP12.99□□□□□ -0.33
SEMA3B-211ENST00000612509 DNAH1Q9P2D7 4330 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 TAS2R45P59539 299 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 RAB2AP61019 212 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 OR2G3Q8NGZ4 309 aa12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-211ENST00000612509 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 ATP6V0CP27449 155 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 EMP1P54849 157 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 ICAM4Q14773 271 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 Q6ZTC4 211 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
SEMA3B-211ENST00000612509 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.33
SEMA3B-211ENST00000612509 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.33
SEMA3B-211ENST00000612509 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 SMLR1H3BR10 107 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 ARPC5O15511 151 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 TSPOP30536 169 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 C12orf74Q32Q52 190 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 RPL7L1Q6DKI1 246 aaKnown RBP12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 TMEM256Q8N2U0 113 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 OR10G4Q8NGN3 311 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 OR10G9Q8NGN4 311 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 OR10G7Q8NGN6 311 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 SH3BGRL3Q9H299 93 aa12.95□□□□□ -0.34
SEMA3B-211ENST00000612509 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 LEPP41159 167 aa12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 KIR3DS1Q14943 382 aa12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 GFI1BQ5VTD9 330 aa12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 C20orf144Q9BQM9 153 aa12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 YTHDF2Q9Y5A9 579 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-211ENST00000612509 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 BORCS7-ASMTA0A0B4J1R7 106 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 TEX48A0A1B0GUV7 120 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 SPART-AS1P0CW21 52 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 ERCC8Q13216 396 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 FAM222AQ5U5X8 452 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 LINC01587Q99440 93 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 Q9H3A6 140 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 DKK2Q9UBU2 259 aa12.93□□□□□ -0.34
SEMA3B-211ENST00000612509 J3KRW8 73 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 PRM2P04554 102 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 TAS2R60P59551 318 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 SERF2P84101 59 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 LYPD1Q8N2G4 141 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 LINC00476Q8WZB0 136 aa12.92□□□□□ -0.34
SEMA3B-211ENST00000612509 H7BYZ3 331 aa12.91□□□□□ -0.34
SEMA3B-211ENST00000612509 MBP02144 154 aa12.91□□□□□ -0.34
SEMA3B-211ENST00000612509 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms