RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RAB4AP20338 218 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 RASL11AQ6T310 242 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 VGLL1Q99990 258 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 PRORYQ9H606 182 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 ZANQ9Y493 2812 aa10.96□□□□□ -0.66
PCDHGA3-202ENST00000612467 CHEK1O14757 476 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 IGHV4-39P01824 125 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 TMEM75Q8N9X5 138 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 SELENOKQ9Y6D0 94 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 CLEC3BP05452 202 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 RHOGP84095 191 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 EBI3Q14213 229 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 MINOS1Q5TGZ0 78 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 ATP5L2Q7Z4Y8 100 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 MINOS1-NBL1R4GNA1 71 aa10.95□□□□□ -0.66
PCDHGA3-202ENST00000612467 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 KLF5Q13887 457 aaPredicted RBP10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 CLEC19AQ6UXS0 136 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 C1orf122Q6ZSJ8 110 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 CBY1Q9Y3M2 126 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 H0Y8G0 127 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 IGHG4P01861 327 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 TFPI2P48307 235 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 ZNF80P51504 273 aaPredicted RBP10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 UBE2E1P51965 193 aa10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 USP9YO00507 2555 aaPredicted RBP10.94□□□□□ -0.66
PCDHGA3-202ENST00000612467 CENPVL3A0A0U1RRI6 287 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 TMEM213A2RRL7 107 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 ERCC8Q13216 396 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 CT83Q5H943 113 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 C20orf144Q9BQM9 153 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 AAMDCQ9H7C9 122 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 TRAV30A0A087WSZ9 112 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 CTRLP40313 264 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 C16orf54Q6UWD8 224 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 THYN1Q9P016 225 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 FAM208BQ5VWN6 2430 aa10.93□□□□□ -0.66
PCDHGA3-202ENST00000612467 IGHV1-24A0A0C4DH33 117 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 NPFFO15130 113 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 NRGNQ92686 78 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 IGHV4-61A0A0C4DH41 118 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 SH2D1AO60880 128 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
PCDHGA3-202ENST00000612467 A0A1B0GUT8 65 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 K7EQM0 130 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 FXYD7P58549 80 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 FAM106AQ4KMX7 169 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 ZNF502Q8TBZ5 544 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 GFRA4Q9GZZ7 299 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 DOPEY1Q5JWR5 2465 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 SERTM2A0A1B0GWG4 89 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 LY6EQ16553 131 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 LYZL1Q6UWQ5 148 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 ZFP30Q9Y2G7 519 aa10.91□□□□□ -0.66
PCDHGA3-202ENST00000612467 OOSP1A8MZH6 123 aa10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 HAX1O00165 279 aa10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 RPLP1P05386 114 aaKnown RBP10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 Q6ZQT7 251 aa10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
PCDHGA3-202ENST00000612467 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 LOC389332A0A1B0GUA5 103 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 TCF21O43680 179 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGHV4-38-2P0DP08 117 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 PPIFP30405 207 aaKnown RBP10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 CSN1S1P47710 185 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 OR4B1Q8NGF8 309 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 CLPSL1A2RUU4 121 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 SMKR1H3BMG3 65 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 PRR25Q96S07 402 aa10.89□□□□□ -0.67
PCDHGA3-202ENST00000612467 LINC00614P0C842 121 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 LOXL1Q08397 574 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 AMN1Q8IY45 258 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 LRRK2Q5S007 2527 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 TRBV12-3P01733 135 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 C5orf56Q8N8D9 126 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 MSRB1Q9NZV6 116 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 RNF24Q9Y225 148 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms