RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 AMN1Q8IY45 258 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 ITLN2Q8WWU7 325 aaPredicted RBP10.42□□□□□ -0.74
TCF3-220ENST00000611869 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 DSCR9P59020 149 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 PSMG4Q5JS54 123 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 TEX29Q8N6K0 151 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
TCF3-220ENST00000611869 USP9YO00507 2555 aaPredicted RBP10.42□□□□□ -0.74
TCF3-220ENST00000611869 COL5A1P20908 1838 aaPredicted RBP10.42□□□□□ -0.74
TCF3-220ENST00000611869 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 HBDP02042 147 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 CACNG7P62955 275 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 C18orf32Q8TCD1 76 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
TCF3-220ENST00000611869 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 SMKR1H3BMG3 65 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 H3BRN7 92 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 OR11H6Q8NGC7 330 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 TANC2Q9HCD6 1990 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 C1orf194Q5T5A4 169 aa10.41□□□□□ -0.74
TCF3-220ENST00000611869 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.74
TCF3-220ENST00000611869 IGLV2-23P01705 113 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 COL4A2P08572 1712 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 F2Z2F3 143 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.74
TCF3-220ENST00000611869 Q0VG73 95 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 EIF4EBP1Q13541 118 aaPredicted RBP10.4□□□□□ -0.74
TCF3-220ENST00000611869 TMEM213A2RRL7 107 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
TCF3-220ENST00000611869 LDLRAD2Q5SZI1 272 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 TRIOO75962 3097 aa10.4□□□□□ -0.74
TCF3-220ENST00000611869 NDUFS8O00217 210 aa10.4□□□□□ -0.75
TCF3-220ENST00000611869 OVOL1O14753 267 aa10.4□□□□□ -0.75
TCF3-220ENST00000611869 PPBPP02775 128 aa10.4□□□□□ -0.75
TCF3-220ENST00000611869 GTF2H5Q6ZYL4 71 aa10.4□□□□□ -0.75
TCF3-220ENST00000611869 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.75
TCF3-220ENST00000611869 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.75
TCF3-220ENST00000611869 PSMB11A5LHX3 300 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 FCN3O75636 299 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 HIVEP3Q5T1R4 2406 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 ATP5LO75964 103 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 PAX1P15863 534 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
TCF3-220ENST00000611869 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 ERASQ7Z444 233 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 SMIM12Q96EX1 92 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 MRPL27Q9P0M9 148 aaKnown RBP10.39□□□□□ -0.75
TCF3-220ENST00000611869 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 ABCA2Q9BZC7 2435 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 K7EIM0 57 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
TCF3-220ENST00000611869 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
TCF3-220ENST00000611869 Q8N7P7 452 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 FAM167A-AS1Q96KT0 104 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 FAM223BA6NKX1 122 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 C1orf122Q6ZSJ8 110 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 DUX3Q96PT4 197 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 DSCAMO60469 2012 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 HIST1H4GQ99525 98 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
TCF3-220ENST00000611869 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 J3QR89 54 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
TCF3-220ENST00000611869 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 NPIPB6E9PJ23 425 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 I3L2K1 104 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 SLC25A16P16260 332 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 FBXL19-AS1Q494R0 122 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 LINC01356Q8N9X3 169 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
TCF3-220ENST00000611869 JKAMPQ9P055 326 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 Q6ZWC4 215 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 PRR25Q96S07 402 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
TCF3-220ENST00000611869 GAGE10A6NGK3 116 aa10.36□□□□□ -0.75
TCF3-220ENST00000611869 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
TCF3-220ENST00000611869 TMEM190Q8WZ59 177 aa10.36□□□□□ -0.75
TCF3-220ENST00000611869 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms