RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
TPM3-223ENST00000611659 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
TPM3-223ENST00000611659 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
TPM3-223ENST00000611659 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
TPM3-223ENST00000611659 IGKV2-40A0A087WW87 121 aaPredicted RBP9.41□□□□□ -0.9
TPM3-223ENST00000611659 TEX22C9J3V5 150 aa9.41□□□□□ -0.9
TPM3-223ENST00000611659 IGKV2D-40P01614 121 aaPredicted RBP9.41□□□□□ -0.9
TPM3-223ENST00000611659 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
TPM3-223ENST00000611659 LINC00311Q8N616 119 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 PRSS33Q8NF86 280 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 ZZEF1O43149 2961 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 TMEM178BH3BS89 294 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 I3L2K1 104 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 AZU1P20160 251 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 EVI2AP22794 236 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 COX7A1P24310 79 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 LOXP28300 417 aaPredicted RBP9.4□□□□□ -0.9
TPM3-223ENST00000611659 GTSCR1Q86UQ5 136 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 Q8TAT8 98 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
TPM3-223ENST00000611659 TRBV6-1A0A0K0K1D8 114 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 NPIPB5A8MRT5 1133 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 LEPP41159 167 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 KLF17Q5JT82 389 aaPredicted RBP9.4□□□□□ -0.91
TPM3-223ENST00000611659 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 U3KQK5 164 aa9.4□□□□□ -0.91
TPM3-223ENST00000611659 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
TPM3-223ENST00000611659 H3BRN7 92 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 GAS8-AS1O95177 125 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
TPM3-223ENST00000611659 ADIPOQQ15848 244 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 TMEM108Q6UXF1 575 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 ZNF491Q8N8L2 437 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
TPM3-223ENST00000611659 MALRD1Q5VYJ5 2156 aa9.39□□□□□ -0.91
TPM3-223ENST00000611659 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
TPM3-223ENST00000611659 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 IGHV1-3A0A0C4DH29 117 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 FOXC2Q99958 501 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 SPOCK3Q9BQ16 436 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 ORM1P02763 201 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 VGLL1Q99990 258 aa9.38□□□□□ -0.91
TPM3-223ENST00000611659 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
TPM3-223ENST00000611659 K7EM74 188 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 CRYGBP07316 175 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 FCER1GP30273 86 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 PPIFP30405 207 aaKnown RBP9.37□□□□□ -0.91
TPM3-223ENST00000611659 PAX8Q06710 450 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 SIGMAR1Q99720 223 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 TMEM160Q9NX00 188 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 TACC2O95359 2948 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 K7EIM0 57 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 DLX6P56179 175 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 WFDC2Q14508 124 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 IGFBPL1Q8WX77 278 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 RPEQ96AT9 228 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 SH3BGRL2Q9UJC5 107 aa9.37□□□□□ -0.91
TPM3-223ENST00000611659 IGKCP01834 107 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 GATA1P15976 413 aaPredicted RBP9.36□□□□□ -0.91
TPM3-223ENST00000611659 ODF1Q14990 250 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 C8orf31Q8N9H6 132 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 ZNF80P51504 273 aaPredicted RBP9.36□□□□□ -0.91
TPM3-223ENST00000611659 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 AMTNQ6UX39 209 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 SH2D6Q7Z4S9 175 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 DYNLRB1Q9NP97 96 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 HHLA3Q9XRX5 114 aa9.36□□□□□ -0.91
TPM3-223ENST00000611659 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 H3BMG7 143 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 PRR25Q96S07 402 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 TMEM8BA6NDV4 472 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 FTH1P19P0C7X4 201 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 ASCL5Q7RTU5 278 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 NUP37Q8NFH4 326 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 TMEM158Q8WZ71 300 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 ACACAQ13085 2346 aa9.35□□□□□ -0.91
TPM3-223ENST00000611659 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
TPM3-223ENST00000611659 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms