RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 TEN1Q86WV5 123 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 TRBV25-1A0A075B6N4 114 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 TIMM23O14925 209 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 FOXI1Q12951 378 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 C8orf49Q96NF6 230 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 RBX1P62877 108 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 SHANK2-AS3Q9BTD1 123 aa16.32■□□□□ 0.2
COL15A1-205ENST00000610452 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 PDE6HQ13956 83 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 SRRM4A7MD48 611 aaKnown RBP16.31■□□□□ 0.2
COL15A1-205ENST00000610452 H0YJW9 148 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 ANKRD39Q53RE8 183 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 E9PLN8 166 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 CFC1BP0CG36 223 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 CFC1P0CG37 223 aa16.31■□□□□ 0.2
COL15A1-205ENST00000610452 APOBEC3AP31941 199 aaPredicted RBP16.31■□□□□ 0.2
COL15A1-205ENST00000610452 FOXG1P55316 489 aaPredicted RBP16.3■□□□□ 0.2
COL15A1-205ENST00000610452 LINC00477Q96M19 166 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 IGLV3-12A0A075B6K2 115 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 FAM27E3Q08E93 113 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 ABCA7Q8IZY2 2146 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 IGHV3-73A0A0B4J1V6 119 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 PAX8Q06710 450 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 C3orf36Q3SXR2 165 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 RS1O15537 224 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 FAM168AQ92567 244 aa16.3■□□□□ 0.2
COL15A1-205ENST00000610452 MRPL23Q16540 153 aaKnown RBP16.29■□□□□ 0.2
COL15A1-205ENST00000610452 LINC01545Q5VT33 79 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 LINC00173Q6ZV60 143 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 HS3ST6Q96QI5 342 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 A0A087WX48 190 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 ZCCHC24Q8N2G6 241 aaKnown RBP16.29■□□□□ 0.2
COL15A1-205ENST00000610452 KIAA2026Q5HYC2 2103 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 A0A087WWL8 130 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 ERCC8Q13216 396 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 TNS1Q9HBL0 1735 aaKnown RBP16.29■□□□□ 0.2
COL15A1-205ENST00000610452 ACYP1P07311 99 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 HAMPP81172 84 aa16.29■□□□□ 0.2
COL15A1-205ENST00000610452 C3orf56Q8N813 242 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 RNF183Q96D59 192 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 FANCMQ8IYD8 2048 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 C9orf139Q6ZV77 190 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 CHCHD5Q9BSY4 110 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 EFNA4P52798 201 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 NDUFC2O95298 119 aa16.28■□□□□ 0.2
COL15A1-205ENST00000610452 FAM236AA0A1B0GUQ0 79 aa16.27■□□□□ 0.2
COL15A1-205ENST00000610452 FAM236BA0A1B0GV22 79 aa16.27■□□□□ 0.2
COL15A1-205ENST00000610452 TCTEX1D4Q5JR98 221 aa16.27■□□□□ 0.2
COL15A1-205ENST00000610452 CENPVQ7Z7K6 275 aaPredicted RBP16.27■□□□□ 0.2
COL15A1-205ENST00000610452 DOCK8Q8NF50 2099 aa16.27■□□□□ 0.2
COL15A1-205ENST00000610452 FXYD2P54710 66 aa16.27■□□□□ 0.19
COL15A1-205ENST00000610452 ATP1A1-AS1Q5TC04 95 aa16.27■□□□□ 0.19
COL15A1-205ENST00000610452 TMEM14BQ9NUH8 114 aa16.27■□□□□ 0.19
COL15A1-205ENST00000610452 J3QQQ9 107 aa16.27■□□□□ 0.19
COL15A1-205ENST00000610452 C1orf159Q96HA4 380 aa16.27■□□□□ 0.19
COL15A1-205ENST00000610452 C15orf32Q32M92 178 aa16.26■□□□□ 0.19
COL15A1-205ENST00000610452 CLPSP04118 112 aa16.26■□□□□ 0.19
COL15A1-205ENST00000610452 IGKV1-16P04430 117 aa16.26■□□□□ 0.19
COL15A1-205ENST00000610452 MRPL14Q6P1L8 145 aaKnown RBP16.26■□□□□ 0.19
COL15A1-205ENST00000610452 ABCA1O95477 2261 aa16.26■□□□□ 0.19
COL15A1-205ENST00000610452 TRAV26-2A0A0B4J265 109 aa16.25■□□□□ 0.19
COL15A1-205ENST00000610452 ANK1P16157 1881 aa16.25■□□□□ 0.19
COL15A1-205ENST00000610452 NDUFA12Q9UI09 145 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 TRBV19A0A075B6N1 114 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 IGLV3-19P01714 112 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 BSPH1Q075Z2 132 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 PTPRDP23468 1912 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 C6orf226Q5I0X4 101 aa16.24■□□□□ 0.19
COL15A1-205ENST00000610452 SMIM2Q9BVW6 85 aa16.23■□□□□ 0.19
COL15A1-205ENST00000610452 SPTBN1Q01082 2364 aaKnown RBP16.23■□□□□ 0.19
COL15A1-205ENST00000610452 ATOX1O00244 68 aa16.23■□□□□ 0.19
COL15A1-205ENST00000610452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.23■□□□□ 0.19
COL15A1-205ENST00000610452 FOXL2NBQ6ZUU3 175 aa16.23■□□□□ 0.19
COL15A1-205ENST00000610452 GGNQ86UU5 652 aa16.23■□□□□ 0.19
COL15A1-205ENST00000610452 DTX2Q86UW9 622 aa16.23■□□□□ 0.19
COL15A1-205ENST00000610452 IGHV1-3A0A0C4DH29 117 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 IGHV1-18A0A0C4DH31 117 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 TMEM200BQ69YZ2 307 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 SIGLEC9Q9Y336 463 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 DOCK6Q96HP0 2047 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 TRPT1Q86TN4 253 aaKnown RBP16.22■□□□□ 0.19
COL15A1-205ENST00000610452 C9orf106Q8NAJ2 232 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 TMEM243Q9BU79 118 aa16.22■□□□□ 0.19
COL15A1-205ENST00000610452 CASP8AP2Q9UKL3 1982 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 TRAV12-1A0A0B4J245 112 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 TRGV4A0A0C4DH28 118 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 RNF5Q99942 180 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 IGHV1-46P01743 117 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 SSC4DQ8WTU2 575 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 A0A1W2PPI3 338 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 K7EMI3 77 aa16.21■□□□□ 0.19
COL15A1-205ENST00000610452 RPL36AP83881 106 aaKnown RBP16.21■□□□□ 0.19
COL15A1-205ENST00000610452 RPL36ALQ969Q0 106 aaKnown RBP16.21■□□□□ 0.19
COL15A1-205ENST00000610452 FAM120AOSQ5T036 256 aa16.2■□□□□ 0.18
COL15A1-205ENST00000610452 CSRP1P21291 193 aaKnown RBP16.2■□□□□ 0.18
COL15A1-205ENST00000610452 IGHV1-8P0DP01 117 aa16.2■□□□□ 0.18
COL15A1-205ENST00000610452 NDPQ00604 133 aa16.2■□□□□ 0.18
COL15A1-205ENST00000610452 PRR25Q96S07 402 aa16.2■□□□□ 0.18
COL15A1-205ENST00000610452 HIGD1BQ9P298 99 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms