RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 HAX1O00165 279 aa16.08■□□□□ 0.16
SSBP3-216ENST00000610401 DEFB125Q8N687 156 aa16.08■□□□□ 0.16
SSBP3-216ENST00000610401 DEFB104AQ8WTQ1 72 aa16.08■□□□□ 0.16
SSBP3-216ENST00000610401 RABAC1Q9UI14 185 aa16.08■□□□□ 0.16
SSBP3-216ENST00000610401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.07■□□□□ 0.161e-8■■■■■ 26.8
SSBP3-216ENST00000610401 TRAV30A0A087WSZ9 112 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 TMEM189A5PLL7 270 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 SIGLEC15Q6ZMC9 328 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 K7EIM0 57 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 K7EQM0 130 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 SPRY2O43597 315 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 GATA1P15976 413 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-216ENST00000610401 CKS2P33552 79 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 PET117Q6UWS5 81 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 ZNF491Q8N8L2 437 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 ZNF492Q9P255 531 aa16.07■□□□□ 0.16
SSBP3-216ENST00000610401 CRXO43186 299 aaPredicted RBP16.06■□□□□ 0.16
SSBP3-216ENST00000610401 PSG3Q16557 428 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 FAM162BQ5T6X4 162 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 DKK2Q9UBU2 259 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 OCIAD2Q56VL3 154 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 PIP4P1Q86T03 277 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.06■□□□□ 0.16
SSBP3-216ENST00000610401 GAGE10A6NGK3 116 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 C2orf91Q6ZV80 131 aa16.06■□□□□ 0.16
SSBP3-216ENST00000610401 CREBBPQ92793 2442 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 ZNF207O43670 478 aaKnown RBP16.05■□□□□ 0.16
SSBP3-216ENST00000610401 ERCC8Q13216 396 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 VGLL1Q99990 258 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 VSTM5A8MXK1 200 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 SH2D1AO60880 128 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 AAMDCQ9H7C9 122 aa16.05■□□□□ 0.16
SSBP3-216ENST00000610401 TMEM30BQ3MIR4 351 aa16.04■□□□□ 0.16
SSBP3-216ENST00000610401 NPYP01303 97 aa16.04■□□□□ 0.16
SSBP3-216ENST00000610401 HIST1H1AQ02539 215 aaPredicted RBP16.04■□□□□ 0.16
SSBP3-216ENST00000610401 TMEM97Q5BJF2 176 aa16.04■□□□□ 0.16
SSBP3-216ENST00000610401 C1RLQ9NZP8 487 aa16.04■□□□□ 0.16
SSBP3-216ENST00000610401 A0A096LNJ9 63 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 SHISA9B4DS77 424 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 INS-IGF2F8WCM5 200 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 IGLV1-47P01700 117 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 CT83Q5H943 113 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 SHANK2-AS3Q9BTD1 123 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-216ENST00000610401 RNF182Q8N6D2 247 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 ZNF414Q96IQ9 312 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 LINC01545Q5VT33 79 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 LINC00311Q8N616 119 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 GFRA4Q9GZZ7 299 aa16.03■□□□□ 0.16
SSBP3-216ENST00000610401 NPIPB6E9PJ23 425 aa16.02■□□□□ 0.16
SSBP3-216ENST00000610401 COTL1Q14019 142 aa16.02■□□□□ 0.16
SSBP3-216ENST00000610401 MRPL51Q4U2R6 128 aaKnown RBP16.02■□□□□ 0.16
SSBP3-216ENST00000610401 PIP4P2Q8N4L2 257 aa16.02■□□□□ 0.16
SSBP3-216ENST00000610401 MEGF9Q9H1U4 602 aa16.02■□□□□ 0.16
SSBP3-216ENST00000610401 SOX21Q9Y651 276 aaPredicted RBP16.02■□□□□ 0.16
SSBP3-216ENST00000610401 COX8AP10176 69 aa16.02■□□□□ 0.15
SSBP3-216ENST00000610401 EGR2P11161 476 aaPredicted RBP16.02■□□□□ 0.15
SSBP3-216ENST00000610401 CEACAM4O75871 244 aa16.01■□□□□ 0.15
SSBP3-216ENST00000610401 ASCL5Q7RTU5 278 aa16.01■□□□□ 0.15
SSBP3-216ENST00000610401 CDKN1BP46527 198 aa16.01■□□□□ 0.15
SSBP3-216ENST00000610401 CRYGBP07316 175 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 RBPJQ06330 500 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 FAM71F2Q6NXP2 309 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 JMJD8Q96S16 334 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 OVOL3O00110 214 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 PRSS1P07477 247 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 GCSHP23434 173 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 Q6ZQT7 251 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 ORMDL3Q8N138 153 aa16■□□□□ 0.15
SSBP3-216ENST00000610401 NDPQ00604 133 aa15.99■□□□□ 0.15
SSBP3-216ENST00000610401 H3BRN7 92 aa15.99■□□□□ 0.15
SSBP3-216ENST00000610401 K7ERJ3 54 aa15.99■□□□□ 0.15
SSBP3-216ENST00000610401 TNFRSF13BO14836 293 aaPredicted RBP15.99■□□□□ 0.15
SSBP3-216ENST00000610401 KIR3DS1Q14943 382 aa15.98■□□□□ 0.15
SSBP3-216ENST00000610401 PEF1Q9UBV8 284 aaKnown RBP15.98■□□□□ 0.15
SSBP3-216ENST00000610401 TRAV26-2A0A0B4J265 109 aa15.98■□□□□ 0.15
SSBP3-216ENST00000610401 CD5LO43866 347 aa15.98■□□□□ 0.15
SSBP3-216ENST00000610401 SMIM12Q96EX1 92 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 CD3EP07766 207 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 ECSCRQ19T08 205 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 SAPCD1Q5SSQ6 148 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 FAM104BQ5XKR9 115 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 MTURNQ8N3F0 131 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 IFI27L1Q96BM0 104 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 CRYBG3Q68DQ2 2970 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 PRAC2D3DTV9 90 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 NBR2O15453 112 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 KLK15Q9H2R5 256 aa15.97■□□□□ 0.15
SSBP3-216ENST00000610401 PLP1P60201 277 aa15.96■□□□□ 0.15
SSBP3-216ENST00000610401 IGFL3Q6UXB1 125 aa15.96■□□□□ 0.15
SSBP3-216ENST00000610401 LCNL1Q6ZST4 164 aa15.96■□□□□ 0.15
SSBP3-216ENST00000610401 A1L4Q6 167 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 APOBEC3AP31941 199 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-216ENST00000610401 ZNF672Q499Z4 452 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-216ENST00000610401 GTSCR1Q86UQ5 136 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 FER1L6-AS1Q8NA97 138 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 LINC00527Q9UJ94 153 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 UFC1Q9Y3C8 167 aa15.95■□□□□ 0.14
SSBP3-216ENST00000610401 FCER1GP30273 86 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms