RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TRAPPC2P0DI81 140 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 TRAPPC2BP0DI82 140 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 PTHLHP12272 177 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 IFITM1P13164 125 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 S100A2P29034 98 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 ETV6P41212 452 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 RPL30P62888 115 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 ZNF90Q03938 601 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 RPL18Q07020 188 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 HES1Q14469 280 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 Q5BKY6 102 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 LINC01545Q5VT33 79 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 Q6ZUT4 128 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 FP248Q71RG6 208 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 KCNRGQ8N5I3 272 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 CLDND2Q8NHS1 167 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 LSM10Q969L4 123 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 YPEL2Q96QA6 119 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 REG4Q9BYZ8 158 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 ASF1BQ9NVP2 202 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 PHLDA3Q9Y5J5 127 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 PXDNLA1KZ92 1463 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 ARHGAP5Q13017 1502 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 BAZ1AQ9NRL2 1556 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 SIPA1L1O43166 1804 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 KIF13AQ9H1H9 1805 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 TRGV5A0A0B4J1U4 118 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 A0A0D9SG52 128 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 A0A1W2PRS3 328 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 A8MWP4 228 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 C3orf84H3BNL1 204 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 K7ERJ3 54 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 RER1O15258 196 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 SYNGR2O43760 224 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 MRPS14O60783 128 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 CSN1S1P47710 185 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 SNRPD3P62318 126 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 UBA52P62987 128 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 EIF5AP63241 154 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 Q0VG73 95 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 KISS1Q15726 138 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 SPRNQ5BIV9 151 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 FAM74A1Q5RGS3 127 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 Q6ZS92 163 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 LINC00471Q8N535 108 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 OR4B1Q8NGF8 309 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 OR5D16Q8NGK9 328 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 CCL4L1Q8NHW4 92 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 PRELID3AQ96N28 172 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 DPY30Q9C005 99 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 Q9H521 79 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 NAA60Q9H7X0 242 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 TRAPPC1Q9Y5R8 145 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 CASKIN1Q8WXD9 1431 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 SCAF11Q99590 1463 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 DLC1Q96QB1 1528 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 NUP98P52948 1817 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 CCDC88AQ3V6T2 1871 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 SHROOM3Q8TF72 1996 aa2.05□□□□□ -2.08
SMCHD1-213ENST00000609587 IGKV1OR2-108A0A075B7D4 117 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 TRGV10A0A0A0MS01 117 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 A6NN06 94 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 RTEL1-TNFRSF6BF6WH68 1400 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 H3BQ85 93 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 H3BT86 120 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 K7ERS5 55 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 LECT2O14960 151 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 OR1I1O60431 355 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 HBDP02042 147 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 RPL27AP46776 148 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 SMARCA4P51532 1647 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 ERVK-7P63135 1459 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 CRB1P82279 1406 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 PYDC2Q56P42 97 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 Q56UQ5 140 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 BPIFA4PQ86YQ2 179 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 AMN1Q8IY45 258 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 Q8NDZ9 215 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 OR4X2Q8NGF9 303 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 OR5AK2Q8NH90 309 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 PFN4Q8NHR9 129 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 NUP205Q92621 2012 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 LRRIQ1Q96JM4 1722 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 LINC00052Q96N35 136 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 MCEEQ96PE7 176 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 ABCA3Q99758 1704 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 SEC11CQ9BY50 192 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 ICOSQ9Y6W8 199 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
SMCHD1-213ENST00000609587 PLXNB1O43157 2135 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 THADAQ6YHU6 1953 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 RBBP6Q7Z6E9 1792 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 GAPVD1Q14C86 1478 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 FYCO1Q9BQS8 1478 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 A0A0J9YW62 118 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 C3orf85A0A1B0GTC6 90 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 OOSP1A8MZH6 123 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 M0R129 80 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 ZNF737O75373 536 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms