RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 SOHLH1Q5JUK2 328 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 C12orf45Q8N5I9 185 aaPredicted RBP11.2□□□□□ -0.62
SGMS1-209ENST00000609445 RNF141Q8WVD5 230 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 SAT2Q96F10 170 aaPredicted RBP11.2□□□□□ -0.62
SGMS1-209ENST00000609445 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 PXMP4Q9Y6I8 212 aa11.2□□□□□ -0.62
SGMS1-209ENST00000609445 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 H7BYZ3 331 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 FAM3BP58499 235 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-209ENST00000609445 S100A10P60903 97 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
SGMS1-209ENST00000609445 C2orf50Q96LR7 162 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 UQCC1Q9NVA1 299 aa11.19□□□□□ -0.62
SGMS1-209ENST00000609445 UBE2L5PA0A1B0GUS4 154 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 RAB31Q13636 194 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 Q6ZRG5 221 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 ZNF586Q9NXT0 402 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
SGMS1-209ENST00000609445 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 H2AFB2P0C5Z0 115 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 BAXQ07812 192 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 RAB32Q13637 225 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 OR1L4Q8NGR5 311 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 C20orf144Q9BQM9 153 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 LYRM2Q9NU23 88 aaPredicted RBP11.17□□□□□ -0.62
SGMS1-209ENST00000609445 SLC39A9Q9NUM3 307 aa11.17□□□□□ -0.62
SGMS1-209ENST00000609445 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 PVALBP20472 110 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-209ENST00000609445 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
SGMS1-209ENST00000609445 SULT1A1P50225 295 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 TNP2Q05952 138 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 ERCC8Q13216 396 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 IL15RAQ13261 267 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 OR5I1Q13606 314 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 CCDC28AQ8IWP9 274 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 TMEM252Q8N6L7 170 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 PFDN5Q99471 154 aa11.16□□□□□ -0.62
SGMS1-209ENST00000609445 GAGE12BA1L429 117 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 M0R3E3 92 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 GAGE7O76087 117 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 FGF7P21781 194 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 LEPP41159 167 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 CCL18P55774 89 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 CLINT1Q14677 625 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 GUK1Q16774 197 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
SGMS1-209ENST00000609445 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 A0A0J9YY99 117 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 PYYP10082 97 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 HOXA5P20719 270 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 S100A11P31949 105 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 C6orf223Q8N319 242 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 CCDC32Q9BV29 185 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 GPN1Q9HCN4 374 aaPredicted RBP11.14□□□□□ -0.63
SGMS1-209ENST00000609445 ABCA13Q86UQ4 5058 aa11.14□□□□□ -0.63
SGMS1-209ENST00000609445 TRBV19A0A075B6N1 114 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 FAM240BA0A1B0GVZ2 78 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 SNURFLB1AK76 121 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 NDUFB4O95168 129 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 RLN2P04090 185 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 HBG1P69891 147 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 HBG2P69892 147 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 STX12Q86Y82 276 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 GNPNAT1Q96EK6 184 aaPredicted RBP11.13□□□□□ -0.63
SGMS1-209ENST00000609445 ODF3Q96PU9 254 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
SGMS1-209ENST00000609445 ZNF253O75346 499 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 M6PRP20645 277 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 Q6ZTI0 123 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 CHAC2Q8WUX2 184 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 TMEM14CQ9P0S9 112 aa11.12□□□□□ -0.63
SGMS1-209ENST00000609445 SIX6O95475 246 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
SGMS1-209ENST00000609445 NHLH2Q02577 135 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 ATP6V1FQ16864 119 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 HSPG2P98160 4391 aa11.11□□□□□ -0.63
SGMS1-209ENST00000609445 LRP1BQ9NZR2 4599 aa11.1□□□□□ -0.63
SGMS1-209ENST00000609445 C7orf71A4D174 169 aa11.1□□□□□ -0.63
SGMS1-209ENST00000609445 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
SGMS1-209ENST00000609445 CD300CQ08708 224 aa11.1□□□□□ -0.63
SGMS1-209ENST00000609445 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
SGMS1-209ENST00000609445 BTN1A1Q13410 526 aa11.1□□□□□ -0.63
SGMS1-209ENST00000609445 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms