RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 Q9UFV3 132 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 LYPD2Q6UXB3 125 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 ZFP36L1Q07352 338 aaKnown RBP10.62□□□□□ -0.71
USP6NL-205ENST00000609104 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
USP6NL-205ENST00000609104 ABCA4P78363 2273 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 MST1P26927 711 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 TMEM190Q8WZ59 177 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 EFNA4P52798 201 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 DSCR9P59020 149 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
USP6NL-205ENST00000609104 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 SOCS3O14543 225 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 RHPN1-AS1Q9BWJ2 59 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
USP6NL-205ENST00000609104 PFN2P35080 140 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 IGKV1-16P04430 117 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
USP6NL-205ENST00000609104 M0R1W7 72 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 LY6HO94772 140 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 ADCYAP1P18509 176 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 PMVKQ15126 192 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 EP300Q09472 2414 aaPredicted RBP10.6□□□□□ -0.71
USP6NL-205ENST00000609104 A8MWP6 167 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 MORN5Q5VZ52 161 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 TNRC6AQ8NDV7 1962 aaKnown RBP10.6□□□□□ -0.71
USP6NL-205ENST00000609104 CFHR1Q03591 330 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
USP6NL-205ENST00000609104 SYNJ2BPP57105 145 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 TMEM75Q8N9X5 138 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 RNF5Q99942 180 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 Q86TA4 180 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 KLHDC3Q9BQ90 382 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 GFRA4Q9GZZ7 299 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 COL8A2P25067 703 aa10.59□□□□□ -0.71
USP6NL-205ENST00000609104 IGKV1D-17A0A075B6S4 117 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 SLC25A16P16260 332 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 LYL1P12980 280 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 SAA4P35542 130 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 DEFB131AP59861 70 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 SPINK13Q1W4C9 94 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 EREGO14944 169 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 Q6ZRM9 215 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 PLXNB3Q9ULL4 1909 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 USF3Q68DE3 2245 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 QRFPP83859 136 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 MRPL52Q86TS9 123 aaKnown RBP10.58□□□□□ -0.72
USP6NL-205ENST00000609104 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-205ENST00000609104 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
USP6NL-205ENST00000609104 B4DSR2 109 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 FGF6P10767 208 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 OOSP1A8MZH6 123 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 KLK9Q9UKQ9 250 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 CEACAM8P31997 349 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-205ENST00000609104 CYYR1Q96J86 154 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 DSCR8Q96T75 97 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 A0A1W2PPI3 338 aa10.57□□□□□ -0.72
USP6NL-205ENST00000609104 IFITM1P13164 125 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 TRBV20-1A0A075B6N2 111 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 TRBV6-6A0A0A6YYG2 114 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 GAGE4Q13068 117 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 GAGE5Q13069 117 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
USP6NL-205ENST00000609104 I3L3M4 83 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 GNLYP22749 145 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 Q0VG73 95 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 NTN3O00634 580 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-205ENST00000609104 Q0VFX4 171 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 PLCE1Q9P212 2302 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 HAMPP81172 84 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 KIAA1549Q9HCM3 1950 aa10.56□□□□□ -0.72
USP6NL-205ENST00000609104 TMEM131Q92545 1883 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 F5H768 121 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 AZU1P20160 251 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 HAPLN4Q86UW8 402 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 PDE6HQ13956 83 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 ACACAQ13085 2346 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 TRACP01848 142 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 C18orf32Q8TCD1 76 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 BPESC1Q9GZL8 116 aa10.55□□□□□ -0.72
USP6NL-205ENST00000609104 IGHV1-24A0A0C4DH33 117 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms