RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 IL4P05112 153 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 RAB1BQ9H0U4 201 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 AP5S1Q9NUS5 200 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 PIEZO2Q9H5I5 2752 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 NBR2O15453 112 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 CSN3P07498 182 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 FCGR2BP31994 310 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-219ENST00000608720 CRIP1P50238 77 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
CTCFL-219ENST00000608720 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 CT45A10P0DMU9 189 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 PDE6HQ13956 83 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 LY6G5BQ8NDX9 201 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 NPBQ8NG41 125 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 DPM3Q9P2X0 92 aa11.53□□□□□ -0.56
CTCFL-219ENST00000608720 SERTM2A0A1B0GWG4 89 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 A0A1W2PPM0 123 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 H3BUT2 72 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 FA2HQ7L5A8 372 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 PRSS3P2Q8NHM4 247 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 AAMDCQ9H7C9 122 aa11.52□□□□□ -0.56
CTCFL-219ENST00000608720 NDUFA3O95167 84 aa11.52□□□□□ -0.57
CTCFL-219ENST00000608720 CSN1S1P47710 185 aa11.52□□□□□ -0.57
CTCFL-219ENST00000608720 KIR3DS1Q14943 382 aa11.52□□□□□ -0.57
CTCFL-219ENST00000608720 OR11H6Q8NGC7 330 aa11.52□□□□□ -0.57
CTCFL-219ENST00000608720 GNG7O60262 68 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 MFAP4P55083 255 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 ZNF672Q499Z4 452 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-219ENST00000608720 CFHR4Q92496 578 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-219ENST00000608720 RABAC1Q9UI14 185 aa11.51□□□□□ -0.57
CTCFL-219ENST00000608720 PKDREJQ9NTG1 2253 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 M0R3E3 92 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 PRR30Q53SZ7 412 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-219ENST00000608720 ASCL2Q99929 193 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 HILPDAQ9Y5L2 63 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 SPCS1Q9Y6A9 102 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 NPIPB5A8MRT5 1133 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 H0Y8G0 127 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 C8orf49Q96NF6 230 aa11.5□□□□□ -0.57
CTCFL-219ENST00000608720 KALRNO60229 2985 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 AZU1P20160 251 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 C5orf64Q2M2E5 130 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-219ENST00000608720 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 MCRIP2Q9BUT9 160 aaKnown RBP11.49□□□□□ -0.57
CTCFL-219ENST00000608720 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-219ENST00000608720 U3KQK5 164 aa11.49□□□□□ -0.57
CTCFL-219ENST00000608720 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 A1L4Q6 167 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 SMAD7O15105 426 aaKnown RBP11.48□□□□□ -0.57
CTCFL-219ENST00000608720 FABP2P12104 132 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 FOXE3Q13461 319 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 LGALS9BQ3B8N2 356 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 COX8CQ7Z4L0 72 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 RELNP78509 3460 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
CTCFL-219ENST00000608720 FBLL1A6NHQ2 334 aaKnown RBP11.47□□□□□ -0.57
CTCFL-219ENST00000608720 HES1Q14469 280 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-219ENST00000608720 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 ZNF562Q6V9R5 426 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 TTC9CQ8N5M4 171 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 S4R3C0 116 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 M0R1W7 72 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 SH2D1AO60880 128 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-219ENST00000608720 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
CTCFL-219ENST00000608720 ABCA1O95477 2261 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 ODF3BA8MYP8 253 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 D6R8Y8 96 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 RPL7P18124 248 aaKnown RBP11.46□□□□□ -0.57
CTCFL-219ENST00000608720 ORMDL3Q8N138 153 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-219ENST00000608720 ARPC1AQ92747 370 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 TIMD4Q96H15 378 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 PRELID3AQ96N28 172 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 THYN1Q9P016 225 aa11.46□□□□□ -0.57
CTCFL-219ENST00000608720 J3QR89 54 aa11.45□□□□□ -0.58
CTCFL-219ENST00000608720 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms