RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 S100A7AQ86SG5 101 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 OR8A1Q8NGG7 326 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 OR1L4Q8NGR5 311 aa9.74□□□□□ -0.85
CTSA-218ENST00000607814 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
CTSA-218ENST00000607814 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
CTSA-218ENST00000607814 FCN2Q15485 313 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 MIR17HGQ75NE6 70 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 SAT2Q96F10 170 aaPredicted RBP9.73□□□□□ -0.85
CTSA-218ENST00000607814 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 TMEM208Q9BTX3 173 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 KRTAP4-5Q9BYR2 181 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 WDR61Q9GZS3 305 aaKnown RBP9.73□□□□□ -0.85
CTSA-218ENST00000607814 WFDC1Q9HC57 220 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 GOLT1BQ9Y3E0 138 aa9.73□□□□□ -0.85
CTSA-218ENST00000607814 A8MTW9 85 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 J3KRW8 73 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 RTL8CO15255 209 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 RPL12P30050 165 aaKnown RBP9.72□□□□□ -0.85
CTSA-218ENST00000607814 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 CHAC2Q8WUX2 184 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 PFDN5Q99471 154 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 HSPB11Q9Y547 144 aa9.72□□□□□ -0.85
CTSA-218ENST00000607814 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 TRAV10A0A0B4J240 114 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 M0R3E3 92 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 P0DMU3 169 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 FAM231AP0DMU4 169 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 FAM231CP0DMU5 169 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 HTN1P15515 57 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 AZU1P20160 251 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 Q5BKY6 102 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 NEU1Q99519 415 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 ATP5SQ99766 215 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.86
CTSA-218ENST00000607814 LOC102723971A0A1B0GUV8 181 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 BOLA2-SMG1P6H3BVE0 249 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 MPDU1O75352 247 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 NDUFB4O95168 129 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 HBE1P02100 147 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 ERCC8Q13216 396 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 FAM167A-AS1Q96KT0 104 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 MED28Q9H204 178 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 RNF24Q9Y225 148 aa9.7□□□□□ -0.86
CTSA-218ENST00000607814 YTHDF2Q9Y5A9 579 aaKnown RBP9.7□□□□□ -0.86
CTSA-218ENST00000607814 TRBV19A0A075B6N1 114 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 INSP01308 110 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 AMBPP02760 352 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 OR10J4P0C629 311 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 SPART-AS1P0CW21 52 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 PET100P0DJ07 73 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 HTN3P15516 51 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 CXCL2P19875 107 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 LINC01587Q99440 93 aa9.69□□□□□ -0.86
CTSA-218ENST00000607814 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 CT45A10P0DMU9 189 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 FFAR4Q5NUL3 377 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 SCGB1C1Q8TD33 95 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 HERC1Q15751 4861 aa9.68□□□□□ -0.86
CTSA-218ENST00000607814 C17orf112F2Z3M2 114 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 IFNA5P01569 189 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 HIST1H1EP10412 219 aaKnown RBP9.67□□□□□ -0.86
CTSA-218ENST00000607814 GUK1Q16774 197 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 FAM122CQ6P4D5 195 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 OR10J6PQ8NGY7 276 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 OR51M1Q9H341 326 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
CTSA-218ENST00000607814 CDKN1BP46527 198 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 ICAM4Q14773 271 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 PAXXQ9BUH6 204 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 FUT9Q9Y231 359 aa9.66□□□□□ -0.86
CTSA-218ENST00000607814 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
CTSA-218ENST00000607814 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 HMGB3O15347 200 aaKnown RBP9.65□□□□□ -0.86
CTSA-218ENST00000607814 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
CTSA-218ENST00000607814 NBEAP1P0C6P0 100 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 SOHLH1Q5JUK2 328 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 GFI1BQ5VTD9 330 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 RNF141Q8WVD5 230 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 PHYHIPLQ96FC7 376 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 NIPSNAP3BQ9BS92 247 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 NDUFAF3Q9BU61 184 aa9.65□□□□□ -0.86
CTSA-218ENST00000607814 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms