RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PCDH15Q96QU1 1955 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 MYO9BQ13459 2157 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 TIMM17BO60830 172 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 FXYD2P54710 66 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 HBBP68871 147 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 C9orf57Q5W0N0 161 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 IGFL3Q6UXB1 125 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 LYZL4Q96KX0 146 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 C4orf45Q96LM5 186 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 CHAC1Q9BUX1 264 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZFP92A6NM28 416 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 SNRPGP62308 76 aaKnown RBP4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 TNFRSF12AQ9NP84 129 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 NHP2Q9NX24 153 aaKnown RBP4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRPM6Q9BX84 2022 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRBV20OR9-2A0A075B6H5 130 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 IRGMA1A4Y4 181 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 SSSCA1O60232 199 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 LGALS3P17931 250 aaKnown RBP4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 IER5LQ5T953 404 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 VN1R4Q7Z5H5 301 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZNF491Q8N8L2 437 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 EYSQ5T1H1 3165 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 ATOX1O00244 68 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC00205P59089 165 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 SPANXN4Q5MJ08 99 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 GNG13Q9P2W3 67 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 CTSZQ9UBR2 303 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 CACNA1BQ00975 2339 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 DOCK9Q9BZ29 2069 aa4.45□□□□□ -1.7
COL4A3BP-207ENST00000604926 ATRXP46100 2492 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRBV5-3A0A0A0MS03 114 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC00313P59037 77 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 S100A7L2Q5SY68 101 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 TREML4Q6UXN2 200 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC01553A4QN01 128 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 C16orf97H3BN30 126 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 RPL38P63173 70 aaKnown RBP4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 TMEM155Q4W5P6 130 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q8N2B8 174 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q6ZS49 121 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 C11orf72Q8NBR9 251 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 RFESDQ8TAC1 157 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 BDP1A6H8Y1 2624 aa4.44□□□□□ -1.7
COL4A3BP-207ENST00000604926 HTTP42858 3142 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 UBE2L6O14933 153 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 S100A3P33764 101 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 NUP214P35658 2090 aaPredicted RBP4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 PSMB2P49721 201 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 UBE2L3P68036 154 aaKnown RBP4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 CCL8P80075 99 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 FAM78AQ5JUQ0 283 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 A0A087WZ39 114 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 NDUFS7O75251 213 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 FXYD6P3P58550 94 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q6ZVQ6 151 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 C6orf201Q7Z4U5 140 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 MYOZ3Q8TDC0 251 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC00597Q9H2U6 94 aa4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 TPRP12270 2363 aaKnown RBP4.43□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRAV9-1A0A075B6T8 112 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 A0A1W2PQD3 144 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 CCL16O15467 120 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 NDUFB3O43676 98 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 RNASE2P10153 161 aaKnown RBP4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 MARCH3Q86UD3 253 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 TAF15Q92804 592 aaKnown RBP eCLIP4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 ANKRD11Q6UB99 2663 aaPredicted RBP4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 H0Y9J4 135 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 H3BVH4 76 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 MP68P56378 58 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 PCBD1P61457 104 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 MORN5Q5VZ52 161 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 OR5AS1Q8N127 324 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 WFDC5Q8TCV5 224 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 REG3AQ06141 175 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 LCA10Q71F78 164 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 MGST2Q99735 147 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q9HAA7 133 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 PCSK5Q92824 1860 aa4.42□□□□□ -1.7
COL4A3BP-207ENST00000604926 IGKV6-21A0A0C4DH24 114 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 UBE2L5PA0A1B0GUS4 154 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZNF584Q8IVC4 421 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC01555Q8NAE3 123 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 H1FXQ92522 213 aaKnown RBP4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 RNASE6Q93091 150 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms