RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
PPFIA3-213ENST00000602905 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
PPFIA3-213ENST00000602905 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
PPFIA3-213ENST00000602905 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 BCL2L11O43521 198 aa11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 ZNF471Q9BX82 626 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 EDA2RQ9HAV5 297 aa11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 CYTL1Q9NRR1 136 aa11.69□□□□□ -0.54
PPFIA3-213ENST00000602905 A8MTW9 85 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 NDUFB4O95168 129 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 ICAM4Q14773 271 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 RAB24Q969Q5 203 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 GOLT1BQ9Y3E0 138 aa11.68□□□□□ -0.54
PPFIA3-213ENST00000602905 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 C1QBP02746 253 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 CSN1S1P47710 185 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 FAM74A1Q5RGS3 127 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 HYLS1Q96M11 299 aa11.67□□□□□ -0.54
PPFIA3-213ENST00000602905 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 BOLA2-SMG1P6H3BVE0 249 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 EIF3GO75821 320 aaKnown RBP eCLIP11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 CXorf1O96002 111 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 STAG3L2P0CL84 134 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 STAG3L3P0CL85 134 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 MIFP14174 115 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 TSPOP30536 169 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 MUC7Q8TAX7 377 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 PHYHIPLQ96FC7 376 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 Q9H3A6 140 aa11.66□□□□□ -0.54
PPFIA3-213ENST00000602905 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 M0R3E3 92 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 INSP01308 110 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 TMEM208Q9BTX3 173 aa11.65□□□□□ -0.54
PPFIA3-213ENST00000602905 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 C3orf84H3BNL1 204 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 M0R2Z0 102 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 TPT1P13693 172 aaKnown RBP11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 CDKN1BP46527 198 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 IQCF2Q8IXL9 164 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 RXFP4Q8TDU9 374 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
PPFIA3-213ENST00000602905 SMIM9A6NGZ8 99 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 GCHFRP30047 84 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 LEPP41159 167 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 BAP18Q8IXM2 172 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 LINC00477Q96M19 166 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 ODF3Q96PU9 254 aa11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
PPFIA3-213ENST00000602905 PGPA6NDG6 321 aa11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 ZFP69Q49AA0 526 aa11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 EIF5AL1Q6IS14 154 aaKnown RBP11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 NEU1Q99519 415 aa11.62□□□□□ -0.55
PPFIA3-213ENST00000602905 TRAV12-2A0A075B6T6 113 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 HBE1P02100 147 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 X6R8D5 127 aa11.61□□□□□ -0.55
PPFIA3-213ENST00000602905 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 A0A1B0GVG6 124 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 CT45A10P0DMU9 189 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 ERCC8Q13216 396 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 Q8NAQ8 132 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
PPFIA3-213ENST00000602905 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 RBAKDNA6NC62 111 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 MAP1LC3B2A6NCE7 125 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 DEFB4AO15263 64 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms