RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 LYRM9A8MSI8 78 aa18.49■□□□□ 0.55
PNKP-216ENST00000601816 E5RGE8 158 aa18.49■□□□□ 0.55
PNKP-216ENST00000601816 LRRC37A5PQ49AS3 106 aa18.49■□□□□ 0.55
PNKP-216ENST00000601816 PRAC2D3DTV9 90 aa18.48■□□□□ 0.55
PNKP-216ENST00000601816 TAS2R60P59551 318 aa18.48■□□□□ 0.55
PNKP-216ENST00000601816 NHLH2Q02577 135 aa18.48■□□□□ 0.55
PNKP-216ENST00000601816 POM121L12Q8N7R1 296 aa18.48■□□□□ 0.55
PNKP-216ENST00000601816 OR5AC2Q9NZP5 309 aa18.48■□□□□ 0.55
PNKP-216ENST00000601816 AZU1P20160 251 aa18.47■□□□□ 0.55
PNKP-216ENST00000601816 CYCSP99999 105 aaKnown RBP18.47■□□□□ 0.55
PNKP-216ENST00000601816 OR5C1Q8NGR4 320 aa18.47■□□□□ 0.55
PNKP-216ENST00000601816 NPCDR1Q9BY65 106 aa18.47■□□□□ 0.55
PNKP-216ENST00000601816 ZNF586Q9NXT0 402 aa18.47■□□□□ 0.55
PNKP-216ENST00000601816 ZNF253O75346 499 aa18.46■□□□□ 0.55
PNKP-216ENST00000601816 DEFA1P59665 94 aa18.46■□□□□ 0.55
PNKP-216ENST00000601816 DEFA3P59666 94 aa18.46■□□□□ 0.55
PNKP-216ENST00000601816 THAP6Q8TBB0 222 aa18.46■□□□□ 0.55
PNKP-216ENST00000601816 MARVELD1Q9BSK0 173 aa18.46■□□□□ 0.55
PNKP-216ENST00000601816 PLAC8L1A1L4L8 177 aa18.45■□□□□ 0.54
PNKP-216ENST00000601816 HTN1P15515 57 aa18.45■□□□□ 0.54
PNKP-216ENST00000601816 TMEM14CQ9P0S9 112 aa18.45■□□□□ 0.54
PNKP-216ENST00000601816 H0YIZ8 118 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 DEFB130BP0DP73 79 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 DEFB130AP0DP74 79 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 TMEM88Q6PEY1 159 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 C16orf74Q96GX8 76 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 C20orf144Q9BQM9 153 aa18.44■□□□□ 0.54
PNKP-216ENST00000601816 PARD6GQ9BYG4 376 aaPredicted RBP18.44■□□□□ 0.54
PNKP-216ENST00000601816 TRBV19A0A075B6N1 114 aa18.43■□□□□ 0.54
PNKP-216ENST00000601816 H7BYZ3 331 aa18.43■□□□□ 0.54
PNKP-216ENST00000601816 HIST1H1EP10412 219 aaKnown RBP18.43■□□□□ 0.54
PNKP-216ENST00000601816 CLINT1Q14677 625 aa18.43■□□□□ 0.54
PNKP-216ENST00000601816 GCSAMLQ5JQS6 135 aa18.43■□□□□ 0.54
PNKP-216ENST00000601816 UBE2DNLQ8IWF7 75 aa18.43■□□□□ 0.54
PNKP-216ENST00000601816 H2BFSP57053 126 aa18.42■□□□□ 0.54
PNKP-216ENST00000601816 KIR3DS1Q14943 382 aa18.42■□□□□ 0.54
PNKP-216ENST00000601816 GFI1BQ5VTD9 330 aa18.42■□□□□ 0.54
PNKP-216ENST00000601816 MRPL53Q96EL3 112 aaKnown RBP18.42■□□□□ 0.54
PNKP-216ENST00000601816 KCNIP2Q9NS61 270 aa18.42■□□□□ 0.54
PNKP-216ENST00000601816 NPIPB6E9PJ23 425 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 SSNA1O43805 119 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 PYYP10082 97 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 FCN2Q15485 313 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 ZNF493Q6ZR52 646 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 PPP1R1CQ8WVI7 109 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 ODF3Q96PU9 254 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 TIMM9Q9Y5J7 89 aa18.41■□□□□ 0.54
PNKP-216ENST00000601816 CT45A10P0DMU9 189 aa18.4■□□□□ 0.54
PNKP-216ENST00000601816 LEPP41159 167 aa18.4■□□□□ 0.54
PNKP-216ENST00000601816 PDE6HQ13956 83 aa18.4■□□□□ 0.54
PNKP-216ENST00000601816 RNASE8Q8TDE3 154 aaKnown RBP18.4■□□□□ 0.54
PNKP-216ENST00000601816 TMEM263Q8WUH6 116 aaKnown RBP18.4■□□□□ 0.54
PNKP-216ENST00000601816 WDR61Q9GZS3 305 aaKnown RBP18.4■□□□□ 0.54
PNKP-216ENST00000601816 PRELID1Q9Y255 219 aa18.4■□□□□ 0.54
PNKP-216ENST00000601816 TIMM8BQ9Y5J9 83 aaPredicted RBP18.4■□□□□ 0.54
PNKP-216ENST00000601816 J3KRW8 73 aa18.39■□□□□ 0.53
PNKP-216ENST00000601816 M0R3E3 92 aa18.39■□□□□ 0.53
PNKP-216ENST00000601816 NDUFB4O95168 129 aa18.39■□□□□ 0.53
PNKP-216ENST00000601816 PET100P0DJ07 73 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 MIR17HGQ75NE6 70 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 CCDC28AQ8IWP9 274 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 C15orf53Q8NAA6 179 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 BLNKQ8WV28 456 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 SLC25A2Q9BXI2 301 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 BATF3Q9NR55 127 aa18.38■□□□□ 0.53
PNKP-216ENST00000601816 ATP5G1P05496 136 aa18.37■□□□□ 0.53
PNKP-216ENST00000601816 ATP5G3P48201 142 aa18.37■□□□□ 0.53
PNKP-216ENST00000601816 AAMDCQ9H7C9 122 aa18.37■□□□□ 0.53
PNKP-216ENST00000601816 NOP10Q9NPE3 64 aaKnown RBP18.37■□□□□ 0.53
PNKP-216ENST00000601816 CBY3A6NI87 242 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 C17orf112F2Z3M2 114 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 F5H768 121 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 MPC2O95563 127 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 FAM167A-AS1Q96KT0 104 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 ATP5SQ99766 215 aa18.36■□□□□ 0.53
PNKP-216ENST00000601816 MRPL32Q9BYC8 188 aaKnown RBP18.36■□□□□ 0.53
PNKP-216ENST00000601816 TRAV12-3A0A0B4J271 114 aa18.35■□□□□ 0.53
PNKP-216ENST00000601816 M0R2N4 97 aa18.35■□□□□ 0.53
PNKP-216ENST00000601816 RNF212Q495C1 297 aa18.35■□□□□ 0.53
PNKP-216ENST00000601816 EXOC3-AS1Q8N2X6 119 aa18.35■□□□□ 0.53
PNKP-216ENST00000601816 ERCC8Q13216 396 aa18.34■□□□□ 0.53
PNKP-216ENST00000601816 LINC00336Q6ZUF6 198 aa18.34■□□□□ 0.53
PNKP-216ENST00000601816 OR51M1Q9H341 326 aa18.34■□□□□ 0.53
PNKP-216ENST00000601816 HSPB11Q9Y547 144 aa18.34■□□□□ 0.53
PNKP-216ENST00000601816 ICAM4Q14773 271 aa18.33■□□□□ 0.52
PNKP-216ENST00000601816 LINC00477Q96M19 166 aa18.33■□□□□ 0.52
PNKP-216ENST00000601816 IGLV2-18A0A075B6J9 118 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 SLC25A5P05141 298 aaKnown RBP18.32■□□□□ 0.52
PNKP-216ENST00000601816 NBEAP1P0C6P0 100 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 LGALS9BQ3B8N2 356 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 PYGO2Q9BRQ0 406 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 PAXXQ9BUH6 204 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 FUT9Q9Y231 359 aa18.32■□□□□ 0.52
PNKP-216ENST00000601816 RPL12P30050 165 aaKnown RBP18.31■□□□□ 0.52
PNKP-216ENST00000601816 HECTD4Q9Y4D8 3996 aa18.31■□□□□ 0.52
PNKP-216ENST00000601816 C7orf71A4D174 169 aa18.3■□□□□ 0.52
PNKP-216ENST00000601816 SNURFLB1AK76 121 aa18.3■□□□□ 0.52
PNKP-216ENST00000601816 IFNA5P01569 189 aa18.3■□□□□ 0.52
PNKP-216ENST00000601816 OR10J4P0C629 311 aa18.3■□□□□ 0.52
PNKP-216ENST00000601816 FAM122CQ6P4D5 195 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms