RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ZNF253O75346 499 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 MPDU1O75352 247 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 FGF7P21781 194 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 TMEM88Q6PEY1 159 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 OR10J6PQ8NGY7 276 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 C20orf144Q9BQM9 153 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 PTTG2Q9NZH5 202 aa15.99■□□□□ 0.15
SSBP4-209ENST00000601357 SIX6O95475 246 aa15.98■□□□□ 0.15
SSBP4-209ENST00000601357 KIR3DS1Q14943 382 aa15.98■□□□□ 0.15
SSBP4-209ENST00000601357 C16orf74Q96GX8 76 aa15.98■□□□□ 0.15
SSBP4-209ENST00000601357 NMES1Q9C002 83 aa15.98■□□□□ 0.15
SSBP4-209ENST00000601357 NHLH2Q02577 135 aa15.97■□□□□ 0.15
SSBP4-209ENST00000601357 FCN2Q15485 313 aa15.97■□□□□ 0.15
SSBP4-209ENST00000601357 RNASE8Q8TDE3 154 aaKnown RBP15.97■□□□□ 0.15
SSBP4-209ENST00000601357 NPCDR1Q9BY65 106 aa15.97■□□□□ 0.15
SSBP4-209ENST00000601357 PARD6GQ9BYG4 376 aaPredicted RBP15.97■□□□□ 0.15
SSBP4-209ENST00000601357 TMEM14CQ9P0S9 112 aa15.97■□□□□ 0.15
SSBP4-209ENST00000601357 TRBV19A0A075B6N1 114 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 NPIPB6E9PJ23 425 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 H7BYZ3 331 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 PRAF2O60831 178 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 DEFB130BP0DP73 79 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 DEFB130AP0DP74 79 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 RNF212Q495C1 297 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 LINC00336Q6ZUF6 198 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 ODF3Q96PU9 254 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 OR5AC2Q9NZP5 309 aa15.96■□□□□ 0.15
SSBP4-209ENST00000601357 E5RGE8 158 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 H0YIZ8 118 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 LGALS9BQ3B8N2 356 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 GFI1BQ5VTD9 330 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 ZNF493Q6ZR52 646 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 OR5C1Q8NGR4 320 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 TMEM263Q8WUH6 116 aaKnown RBP15.95■□□□□ 0.14
SSBP4-209ENST00000601357 MRPL53Q96EL3 112 aaKnown RBP15.95■□□□□ 0.14
SSBP4-209ENST00000601357 MARVELD1Q9BSK0 173 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 HERC2O95714 4834 aa15.95■□□□□ 0.14
SSBP4-209ENST00000601357 NDUFB4O95168 129 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 RLN2P04090 185 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 CT45A10P0DMU9 189 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 HTN1P15515 57 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 GCSAMLQ5JQS6 135 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 UBE2DNLQ8IWF7 75 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 C15orf53Q8NAA6 179 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 THAP6Q8TBB0 222 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 SLC25A31Q9H0C2 315 aa15.94■□□□□ 0.14
SSBP4-209ENST00000601357 TIMM8BQ9Y5J9 83 aaPredicted RBP15.94■□□□□ 0.14
SSBP4-209ENST00000601357 NACAE9PAV3 2078 aa15.93■□□□□ 0.14
SSBP4-209ENST00000601357 DNAH17Q9UFH2 4485 aa15.93■□□□□ 0.14
SSBP4-209ENST00000601357 CBY3A6NI87 242 aa15.93■□□□□ 0.14
SSBP4-209ENST00000601357 INMT-MINDY4F8WBC2 141 aa15.93■□□□□ 0.14
SSBP4-209ENST00000601357 HIST1H1EP10412 219 aaKnown RBP15.93■□□□□ 0.14
SSBP4-209ENST00000601357 H2BFSP57053 126 aa15.93■□□□□ 0.14
SSBP4-209ENST00000601357 M0R2N4 97 aa15.92■□□□□ 0.14
SSBP4-209ENST00000601357 PYYP10082 97 aa15.92■□□□□ 0.14
SSBP4-209ENST00000601357 CYCSP99999 105 aaKnown RBP15.92■□□□□ 0.14
SSBP4-209ENST00000601357 PDE6HQ13956 83 aa15.92■□□□□ 0.14
SSBP4-209ENST00000601357 LRRC37A5PQ49AS3 106 aa15.92■□□□□ 0.14
SSBP4-209ENST00000601357 Q6ZR54 194 aa15.92■□□□□ 0.14
SSBP4-209ENST00000601357 M0R3E3 92 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 RTL8CO15255 209 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 ATP5G1P05496 136 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 ATP5G3P48201 142 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 FAM167A-AS1Q96KT0 104 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 SLC25A2Q9BXI2 301 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 NOP10Q9NPE3 64 aaKnown RBP15.91■□□□□ 0.14
SSBP4-209ENST00000601357 PKHD1P08F94 4074 aa15.91■□□□□ 0.14
SSBP4-209ENST00000601357 A0A1B0GVY2 172 aa15.9■□□□□ 0.14
SSBP4-209ENST00000601357 LEPP41159 167 aa15.9■□□□□ 0.14
SSBP4-209ENST00000601357 LINC00612Q8N6U2 182 aa15.9■□□□□ 0.14
SSBP4-209ENST00000601357 PRELID1Q9Y255 219 aa15.9■□□□□ 0.14
SSBP4-209ENST00000601357 F5H768 121 aa15.89■□□□□ 0.13
SSBP4-209ENST00000601357 CLINT1Q14677 625 aa15.89■□□□□ 0.13
SSBP4-209ENST00000601357 PPP1R1CQ8WVI7 109 aa15.89■□□□□ 0.13
SSBP4-209ENST00000601357 FAM19A4Q96LR4 140 aa15.89■□□□□ 0.13
SSBP4-209ENST00000601357 WDR61Q9GZS3 305 aaKnown RBP15.89■□□□□ 0.13
SSBP4-209ENST00000601357 TIMM9Q9Y5J7 89 aa15.89■□□□□ 0.13
SSBP4-209ENST00000601357 IGLV2-18A0A075B6J9 118 aa15.88■□□□□ 0.13
SSBP4-209ENST00000601357 TRAV12-3A0A0B4J271 114 aa15.88■□□□□ 0.13
SSBP4-209ENST00000601357 FAM3BP58499 235 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-209ENST00000601357 MIR17HGQ75NE6 70 aa15.88■□□□□ 0.13
SSBP4-209ENST00000601357 KIAA1109Q2LD37 5005 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 J3KRW8 73 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 ERCC8Q13216 396 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 CCDC28AQ8IWP9 274 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 EXOC3-AS1Q8N2X6 119 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 BLNKQ8WV28 456 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 KCNIP2Q9NS61 270 aa15.87■□□□□ 0.13
SSBP4-209ENST00000601357 KLLNB2CW77 178 aa15.86■□□□□ 0.13
SSBP4-209ENST00000601357 LINC00477Q96M19 166 aa15.86■□□□□ 0.13
SSBP4-209ENST00000601357 PYGO2Q9BRQ0 406 aa15.86■□□□□ 0.13
SSBP4-209ENST00000601357 AGPAT4-IT1Q9H0P7 198 aa15.86■□□□□ 0.13
SSBP4-209ENST00000601357 MPC2O95563 127 aa15.85■□□□□ 0.13
SSBP4-209ENST00000601357 SLC25A5P05141 298 aaKnown RBP15.85■□□□□ 0.13
SSBP4-209ENST00000601357 DEFA1P59665 94 aa15.85■□□□□ 0.13
SSBP4-209ENST00000601357 DEFA3P59666 94 aa15.85■□□□□ 0.13
SSBP4-209ENST00000601357 C9orf47Q6ZRZ4 202 aa15.85■□□□□ 0.13
SSBP4-209ENST00000601357 MRPL32Q9BYC8 188 aaKnown RBP15.85■□□□□ 0.13
SSBP4-209ENST00000601357 AAMDCQ9H7C9 122 aa15.85■□□□□ 0.13
SSBP4-209ENST00000601357 PKD1P98161 4303 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms